RNA-Seq analysis of resistant and susceptible potato varieties during the early stages of potato virus Y infection

Table 4 Disease resistance annotated-genes which were DE (p < 0.05) after PVY inoculation

Gene ID	PR_PVY^O		PR_PVY^NTN		RB_PVY^O		Chr.
Gene ID	4 hpi	10 hpi	4 hpi	10 hpi	4 hpi	10 hpi	Chr.
PGSC0003DMG400029314	−1.10	n.s.	−1.42	n.s.	n.s.	n.s.	12
PGSC0003DMG400029415	−0.79	n.s.	−1.06	n.s.	n.s.	n.s.	12
PGSC0003DMG400024661	−1.00	n.s.	−1.08	n.s.	n.s.	n.s.	3
PGSC0003DMG400005542	−0.75	n.s.	n.s.	n.s.	n.s.	n.s.	12
PGSC0003DMG400008296	n.s.	n.s.	n.s.	+1.84	n.s.	n.s.	2
PGSC0003DMG400029586	n.s.	n.s.	n.s.	n.s.	+1.25	n.s.	8
PGSC0003DMG400044242	n.s.	n.s.	n.s.	n.s.	n.s.	+1.68	7

Data are |log₂(FC)|. Genes which were identified as pseudogenes by Lozano et al. [11] are italicized

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