Skip to main content

Advertisement

Table 7 Carcinus maenas pathogen associated molecular pattern recognition genes

From: De novo assembly of the Carcinus maenas transcriptome and characterization of innate immune system pathways

PRP group Transcript Identity (%) Length E-value Query Ancestor
GNBP comp44152_c0_seq1 42.06 340 1.00e-65 gi|300507044 : gram-negative binding protein [Artemia sinica] Crustacea
  comp44453_c0_seq (1–2) 58.06 341 3.00e-123 gi|62122584 : GNBP [Oryzias latipes] Bilateria
  comp74133_c0_seq1 44.8 346 8.00e-88 gi|62122584 : GNBP [Oryzias latipes] Bilateria
  comp83740_c0_seq (1–5) 46.02 339 5.00e-87 gi|62122584 : GNBP [Oryzias latipes] Bilateria
  comp19734_c0_seq1 41.55 142 8.00e-32 gi|62122584 : GNBP [Oryzias latipes] Bilateria
  comp136078_c0_seq1 62.96 81 3.00e-26 gi|62122584 : GNBP [Oryzias latipes] Bilateria
  comp75261_c0_seq1 27.57 243 6.00e-22 gi|62122584 : GNBP [Oryzias latipes] Bilateria
TECP comp85313_c2_seq1 39.94 318 6.00e-63 gi|385049105 : thioester containing protein 3, partial [Daphnia parvula] Crustacea
  comp65627_c0_seq1 46.34 246 3.00e-58 gi|54644242 : Thioester-containing protein 6 [Drosophila pseudoobscura pseudoobscura] Pancrustacea
  comp87629_c0_seq4 74.36 234 6.00e-101 gi|331031264 : TEP isoform 2 [Pacifastacus leniusculus] Pleocyemata
  comp74624_c1_seq1 40.65 310 8.00e-56 gi|385049099 : thioester containing protein 3, partial [Daphnia pulex] Crustacea
  comp65627_c1_seq1 36.78 590 6.00e-118 gi|54644242 : Thioester-containing protein 6 [Drosophila pseudoobscura pseudoobscura] Pancrustacea
  comp74624_c2_seq1 37.83 534 1.00e-105 gi|54644242 : Thioester-containing protein 6 [Drosophila pseudoobscura pseudoobscura] Pancrustacea
  comp85313_c0_seq1 38.14 430 1.00e-80 gi|568250870 : thioester-containing protein [Anopheles darlingi] Pancrustacea
  comp103781_c0_seq1 43.36 113 4.00e-22 gi|54644242 : Thioester-containing protein 6 [Drosophila pseudoobscura pseudoobscura] Pancrustacea
C-Type Lectin comp69837_c0_seq1 43.15 146 1.00e-25 gi|558633447 : C-type lectin [Marsupenaeus japonicus] Decapoda
  comp86095_c0_seq (1–2) 43.92 148 2.00e-25 gi|558633447 : C-type lectin [Marsupenaeus japonicus] Decapoda
  comp68699_c0_seq1 38.89 144 1.00e-24 gi|558633447 : C-type lectin [Marsupenaeus japonicus] Decapoda
  comp87731_c3_seq (2–3) 33.78 225 8.00e-25 gi|657397985 : C-type lectin receptor-like tyrosine-kinase plant [Medicago truncatula] Eukaryota
  comp88573_c0_seq (1–2) 57.5 80 4.00e-22 gi|676264911 : C-type lectin domain family 3 member A [Fukomys damarensis] Bilateria
  comp90611_c0_seq1 64.56 158 5.00e-60 gi|575878533 : C-type lectin [Scylla paramamosain] Portunoidea