De novo assembly of the Carcinus maenas transcriptome and characterization of innate immune system pathways

BMC Genomics

Table 8 Carcinus maenas Immune system response proteins

Response protein	Transcript	Identity (%)	Length	E-value	Query	Ancestor
ALF	comp79835_c0_seq2	65.98	97	2.00e-34	gi\|302138013 : anti-lipopolysacharide factor [Fenneropenaeus indicus]	Decapoda
Crustin	comp88229_c1_seq1	56.36	110	8.00e-31	gi\|162945361 : crustin antimicrobial peptide [Scylla paramamosain]	Portunoidea
	comp91133_c0_seq1	65.38	78	7.00e-24	gi\|255653868 : crustin 1 [Panulirus japonicus]	Pleocyemata
Carcinin	comp88229_c1_seq1	86.36	110	1.00e-49	gi\|18157188 : carcinin [Carcinus maenas]	Carcinus maenas
Lysozyme	comp83352_c1_seq4	41.13	124	4.00e-23	gi\|675374133 : Lysozyme 1, partial [Stegodyphus mimosarum]	Arthropoda
	comp83352_c1_seq2	41.13	124	4.00e-23	gi\|675374133 : Lysozyme 1, partial [Stegodyphus mimosarum]	Arthropoda
	comp83352_c1_seq1	41.13	124	4.00e-23	gi\|675374133 : Lysozyme 1, partial [Stegodyphus mimosarum]	Arthropoda
iNOS	comp89503_c2_seq (1–26)	52.6	308	1.00e-96	gi\|13359094 : nitric oxide synthase 2 [Meriones unguiculatus]	Pancrustacea

ISSN: 1471-2164