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Table 1 Number and frequency of parallelisms in human segmental duplications

From: Interlocus gene conversion explains at least 2.7 % of single nucleotide variants in human segmental duplications

QC filter Number of parallelisms Number of higher order parallelisms Number of SNPs in parallelisms Number of SNPs in SDs Percentage of SD SNPs in parallelisms
No filters 48,996 3,227 78,532 1,216,383 6.46
High quality alignment 41,970 2,683 68,568 747,278 9.18
Uniquely mapping SNPs + High quality alignment 30,729 1,982 50,413 610,166 8.26
Non-CpG Sites + Uniquely mapping SNPs + High quality alignment 15,790 606 28,747 554,600 5.18