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Table 1 Genomic distribution of PACs and PATs

From: Genome-wide characterization of intergenic polyadenylation sites redefines gene spaces in Arabidopsis thaliana

Region

PAC#

PAT#

PAC%

PAT%

3’-UTRa

28,266

2,129,949

51.77 %

91.13 %

Intergenic

16,567

64,550

30.34 %

2.76 %

CDS

3773

10,944

6.91 %

0.47 %

Intron

2301

6744

4.21 %

0.29 %

5’-UTR

208

6567

0.38 %

0.28 %

Exon

406

2791

0.74 %

0.12 %

Pseudogenic exon

102

1193

0.19 %

0.05 %

AMBb

2976

114,436

5.45 %

4.90 %

Total

54,599

2,337,174

100.00 %

100.00 %

  1. a3’-UTRs were extended by 50 nt beyond the annotated poly(A) site by TAIR10
  2. bAMB: ambiguously mapped at regions that have different annotations due to alternative transcription or RNA processing