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Table 1 Top 50 differentially expressed genes in MG and A1

From: Transcriptional maturation of the mouse auditory forebrain

MG > A1

A1 > MG

P7

P14

P21

Adult

P7

P14

P21

Adult

Agt

Igsf1

Tnnt1

Tcf7l2

Met

Met

Mpped1

Mpped1

Zmat4

Ntng1

Vav3

Slc17a6

Sla

Nov

Rasgef1c

Sema3a

Rgs8

Cachd1

Igsf1

Agt

Mef2c

Satb2

Chrm4

Satb2

Lhx9

Pappa

Shisa6

Zfhx3

Sema3a

Mpped1

Met

E130012a19rik

Id4

Prkch

Amotl1

Prox1

Gda

Mef2c

Ngef

Nov

Aw551984

Plekhd1

Inadl

Tanc1

Pde2a

Sema3a

Pdzrn3

Cckbr

Zfhx3

Zic1

Itih3

Vav3

Satb1

Kcnf1

Scube1

Mef2c

Baiap3

Cacng5

Fhdc1

Synpo2

Mlip

Fam81a

Cckbr

Ngef

Slc6a4

Inadl

Ret

Srgap1

Kcnf1

Foxp1

Foxp1

Dkkl1

Calb2

Prox1

Tanc1

Clmn

Dok5

Gm11549

Kcnf1

Lamp5

Slitrk6

Synpo2

Pcp4l1

Cacng5

Dnah5

Satb1

Efcab6

Bmp3

Rbms3

Lef1

Nell1

Adra2b

Baiap2

Ipcef1

Rasl11b

Efcab6

Epb4.1l4b

Vamp1

Rab37

Frem3

Ipcef1

Tiam2

Unc5d

Atp6ap1l

Cachd1

Slc17a6

Zfp423

Zic1

Phyhip

Vip

Atp6ap1l

Stx1a

Car10

Tcf7l2

Synpo2

Itih3

Lmo4

Tbr1

Hs3st2

Arpp19

Vav3

Calb2

Lef1

Slitrk6

Nrip1

Chrdl1

Myl4

Homer1

Frem3

Vav3

Gdf11

Syt9

Tiam2

Efcab6

Pak6

Rasgef1c

Arhgap24

Sema5a

Grm4

Vangl1

Cnksr2

Atp1a1

Satb1

Rasl11b

Pappa

Frem3

Tcf7l2

Rora

Cd24a

Kcnj4

E130012a19rik

Dtl

Epha10

Slitrk6

Epn3

Onecut2

Kcnv1

Plk2

Kcnh3

Cdkl4

Nell1

Tanc1

Plekhd1

Sparc

Efcab6

Ngef

Efnb2

Met

Sash1

F13a1

Trpm3

Inpp4b

Sstr4

Efnb2

Stx1a

Exph5

Rora

Pde1c

Rbms3

Inadl

Thrb

Cckbr

Dtl

Col19a1

Tshz1

Vangl1

Cacng5

Abhd12b

Foxp1

Phactr1

Olfm2

Atp2b4

Hap1

Amotl1

Mcf2

Prkch

Fbxw7

Thrb

Fam81a

Ipcef1

Slc18a2

Lhx9

Cachd1

Grid2ip

Gm26937

Fmn1

Syt16

Tbr1

B3galt5

Nell1

Zfhx3

Adamts19

Jph1

Mlip

Dclk3

Vip

Foxp2

Slc6a11

Nefh

Fhdc1

Gucy1a3

Sla

Exph5

Cd34

Igsf1

Tnnt1

Trim67

Fam19a4

Dlgap2

Rasl11b

Chrdl1

Ltk

Zfp423

Slc6a9

Ttyh2

Gm16148

Hs3st2

Atp6ap1l

Tmem132d

Chrm4

Plcb4

Ablim3

Arhgap24

Edaradd

Fam49a

Syt16

Arl4d

Arhgap10

Cdh4

Gpr116

Prkch

Scube2

Ptprk

Scube1

Doc2a

Cabp1

Klhl13

Shox2

Fign

Ano5

Phactr1

Cnksr2

Grm3

Dact2

Cacna2d2

Col25a1

Cpne7

Slc6a11

Ndrg1

Exph5

Ppp1r1b

Tmem132d

P2ry1

Arhgap24

Adra2b

Ret

Kcnj4

Kcnh3

Nlk

Vill

Pde1c

Syt9

Plxdc1

Pappa

Trpa1

Rprml

Meis2

Meis2

Col25a1

Hapln4

F2r

Vash2

Scube1

Prkcb

Arpp19

Hkdc1

Bcas1

Slc29a1

Grid2ip

Slc29a1

Cntn3

Camk2n1

Kcnh7

Tshz3

Plxnb3

Cpne9

Slitrk6

P2ry1

Sox5

Gm872

Bmp3

Kcnh7

Gbx2

Plcb4

Vash2

Mctp2

Adamts3

Pde2a

Dact2

Kcnh4

Cnp

Sgpp2

Sgpp2

Glra1

Ntsr1

Kcnt2

Lzts1

Hs3st2

Arhgef16

Rimkla

Sema5a

Dusp27

Kcnq5

Hs3st2

Boc

C130074g19rik

Pik3r3

Rab37

Wnt3

Adamts15

Etv6

Fbxw7

Pou6f1

Scube1

Col11a2

Rbms3

Lhx9

Adarb1

Vcan

Lmo4

Tshz3

Egr3

Vamp1

Fhdc1

Clmn

Ramp3

Mapk15

Tshz3

Osbpl10

Camk2n1

Irx2

Rasa4

Srgap1

Grm1

Nr2f1

Tgm3

Kcnh4

Tgm3

Btbd11

Ptpn3

Rimkla

Zfp804a

Nudt4

Bcl11a

Tgm3

Lzts1

Alk

Adamts15

Fads6

Lef1

Rhou

Cdk17

Arhgap10

1110032f04rik

Itpr2

Gbx2

Scube2

A2m

Vip

Ephx4

Sowahb

Atp1a1

Cdh22

P2ry1

Vipr2

Wnt3

Plk2

Lzts1

Tcap

Ankrd63

  1. The top 50 differentially expressed genes between MG and A1 are listed by postnatal age. Left columns, genes with significantly higher expression levels in MG compared to A1. Right columns, genes with higher expression levels in A1 compared to MG. Significance (p < 0.05) and ranking determined by differential expression by DESeq2, EdgeR, and BaySeq. Genes listed in more than one age group are noted in the text. Non-coding and genes of unknown type were excluded