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Table 2 Number of unique or recurrent CNV calls on the autosomes by mouse classification

From: Genomic copy number variation in Mus musculus

Mouse classification

CNV occurrence a

Unique/recurrent

Unique

Recurrent

All

2418

(7.24)

7216

(21.60)

0.34

Classical

576

(5.05)

2248

(19.72)

0.26

Wild derived

870

(16.73)

1741

(33.48)

0.46

Wild caught

453

(23.84)

516

(27.16)

0.88

C57BL/6 J

12

(1.5)

78

(9.75)

0.15

C57BL/6NJ

0

(0)

46

(7.6)

0.00

  1. Uniqueness and recurrence (found in two or more mice) are both consistently based on the entire analysis and are not reevaluated within mouse classification types (classical, wild derived, etc.), i.e. a call being unique in the wild-caught group was not found to overlap with any other call in the entire analysis and is not only unique within the samples classified as wild caught. In brackets, the call count is normalized by sample size
  2. aA call is considered recurrent if it has 40 % reciprocal overlap with any other call