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Table 5 Iron acquisition systems of P. salmonis

From: Transcriptional response of Atlantic salmon families to Piscirickettsia salmonis infection highlights the relevance of the iron-deprivation defence system

aGenbank ID

bORF

cLength (bp)

dClosest homolog in Genbank (blastx)

eE value

fProtein identity (%)

KJ804204

fur

444

WP_018274636.1 Fur family transcriptional regulator [Teredinibacter turnerae]

3.0E-70

68

KJ804205

feoA

234

YP_004591266.1 ferrous iron transport, protein A [Enterobacter aerogenes]

2.0E-14

51

KJ804206

feoB

2085

YP_003038990.1 ferrous iron transport, protein B [Photorhabdus asymbiotica]

1.0E-104

53

KJ804207

feoC

285

YP_002799440.1 ferrous iron transport, protein protein C [Azotobacter vinelandii]

4.0E-06

33

KJ804208

fhuA/hemeR

1974

YP_001184687.1 tonB-dependent hemin/siderophore receptor [Shewanella sp.]

1.0E-32

24

KJ804209

tonB

789

YP_003459692.1 tonB family protein [Thioalkalivibrio sp.]

4.0E-16

41

KJ804210

exbD

630

WP_021695817.1 biopolymer transport protein ExbD/TolR [Loktanella cinnabarina]

7.0E-06

64

KJ804211

exbB

660

YP_006295784.1biopolymer transport protein ExbB [Methylophaga nitratireducenticrescens]

6.0E-21

58

KJ804212

fhuD

981

NP_484432.1 periplasmic iron (III) -binding protein, ABC transporter [Nostoc sp.]

1.0E-18

52

KJ804213

fhuB

2037

YP_323336.1 iron-hydroxamate transporter permease [Anabaena variabilis]

3.0E-46

44

KJ804215

fhuC

858

WP_006640164.1 iron-hydroxamate ABC transporter ATP-binding protein [Bacillus sonorensis]

2.0E-61

54

KJ804218

pvuA

2190

YP_159259.1 siderophore receptor, TonB-dependent [Aromatoleum aromaticum]

2.0E-148

45

KJ804219

pvsA

1206

WP_018314298.1 siderophore biosynthesis [Cupriavidus sp.]

1.0E-79

51

KJ804220

pvsB

1335

WP_018077816.1 siderophore biosynthesis, (carboxylate-amine ligase) [Thiobacillus denitrificans]

4.0E-69

47

KJ804221

pvsC

1239

WP_005449425.1 Multi-drug efflux pump PvsC [Vibrio harveyi]

4.0E-62

35

KJ804222

pvsD

1812

YP_747943.1 siderophore biosynthesis, IucA/IucC family protein [Nitrosomonas eutropha]

2.0E-67

42

KJ804223

pvsE

1063

AHI32018.1 siderophore biosynthesis (diaminopimelate decarboxylase) [Marinobacter sp.]

4.0E-137

49

  1. aGenBank accession numbers
  2. bOpen Reading Frame
  3. cLength of gen (bp)
  4. dClosest annoted homolog in Genbank by blastx against nr database
  5. e E value and
  6. fProtein identity (%)
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BMC Genomics

ISSN: 1471-2164

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