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Table 6 Transcript expression profiles in Medicago sativa ssp. sativa (B47) and M. sativa ssp. falcata (F56)

From: The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies

Tissue

M. sativa ssp. sativa (B47)

M. sativa ssp. falcata (F56)

Common

Expressed

Tissue-specific

Expressed

Tissue-specific

Tissue-specific

Leaf

71,003

1,712

74,251

1,233

255

Flower

78,163

3,970

79,320

4,199

2,919

ES

77,220

581

74,612

475

70

PES

73,768

293

76,693

332

52

Root

77,840

3,374

76,167

2,821

1,329

Nodule

75,442

7,491

72,594

7,605

5,736

Total

104,787

17,421

104,040

16,665

All Total: 112,626

  1. Transcripts must have an RPKM ≥1 to be considered expressed. Tissue-specific transcripts have an RPKM ≥1 in a single tissue but an RPKM <0 in all other tissues. The number of tissue-specific transcripts common to both M. sativa subspecies is denoted in the common column. Total number of transcripts expressed in each sub-species and transcripts that are tissue specific are denoted in the last row
  2. ES elongating stem internodes, PES post-elongation stem internodes