Skip to main content

Table 1 De novo assembly statistics for the three fox individuals

From: Genetic signatures of adaptation revealed from transcriptome sequencing of Arctic and red foxes

Assembly statistics Arctic fox1 (VlagF01) Arctic fox2 (VlagF02) Red fox (VvulF01) Pooled Arctic foxes (VlagF01 + VlagF02)
Total number of transcripts 139910 187219 156656 258600
Total assembled nucleotide bases 141142680 216201659 156970631 282473292
N50 contig length 2085 2700 2128 2774
Mean contig length 1008.8 1154.8 1002.0 1092.3
Median contig length 443 423 421 369
  1. In addition the two Arctic fox individuals were used to generate a pooled assembly. Lab ID is shown in brackets