Table 3 Candidate genes under selection at 80 SNPs in LOSITAN and BAYESCAN. SE = Silver eels; GE = Glass eels
From: Signatures of natural selection between life cycle stages separated by metamorphosis in European eel
Samples | LOSITAN | BAYESCAN |
|---|---|---|
All samples (SE + GE) | ALD_R | ALD-R |
(He = 0.34; FST = 0.12; p = 0.001) | (BPP = 1.00; q = 0.000; alpha = 2.1) | |
GAPDH | GAPDH | |
(He = 0.17; FST = 0.27; p = 0.001) | (BPP = 1.00; q = 0.000; alpha = 2.6) | |
CLIC_5_10148 | ||
(He = 0.50; FST = 0.05; p = 0.009) | ||
Silver eels (SE) | CLIC_5_10148 | |
(He = 0.51; FST = 0.09; p = 0.003) | ||
LDH_B_9441 | ||
(He = 0.03; FST = 0.03; p = 0.047) | ||
SE(pooled) vs. GE(pooled) | GAPDH | |
(He = 0.14; FST = 0.05; p = 0.010) | ||
Spain (SE vs. GE) | CLIC_5_10148 | |
(He = 0.51; FST = 0.08; p = 0.018) | ||
Ireland (SE vs. GE) | CST_21113 | |
(He = 0.44; FST = 0.07; p = 0.023) | ||
CSDE_1_19713 | ||
(He = 0.05; FST = 0.04; p = 0.049) | ||
Iceland (SE vs. GE) | GAPDH | GAPDH |
(He = 0.41; FST = 0.33; p = 0.001) | (BPP = 1.00; q = 0.000; alpha = 2.4) |