Table 2 Comparative statistics on the length and nucleotide composition of the four F. graminearum chromosomes. Comparison of the MIPS (old) and RRes (new) versions of the reference genome
From: The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum
Reference | MIPS | RRes | |||||
|---|---|---|---|---|---|---|---|
Chromosome | Number of total bases (bp) | Number of ‘N’ bases (bp) | Total number of bases minus ‘N’ bases (bp) | Number of total bases (bp) | Number of ‘N’ bases (bp) | Total number of bases minus ‘N’ bases (bp) | Length difference RR vs. MIPS (bp)a |
1 | 11,694,295 | 65,691 | 11,628,604 | 11,760,950 | 12 | 11,760,938 | +132,334 |
2 | 8,911,601 | 49,430 | 8,862,171 | 8,997,558 | 0 | 8,997,558 | +135,387 |
3 | 7,711,129 | 32,005 | 7,679,124 | 7,792,947 | 0 | 7,792,947 | +113,823 |
4 | 8,029,942 (85,155b) | 65,717 | 7,964,225 | 9,397,177 (1,384,836b) | 0 | 9,407,501 | +1,432,952 |
Totals | 36,346,967 | 212,843 | 36,134,124 | 37,948,632 | 12 | 37,958,944 | +1,824,820 |