Skip to main content

Advertisement

Table 3 Basic statistics of the different reference and annotation versions of F. graminearum. A comparison of F. graminearum genome version statistics between BROAD, MIPS, and RRes

From: The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum

  BROAD MIPS RRes
Genome size (bp)a 36,565,771 36,553,761 38,060,440
Scaffoldsb 31 19 5
GC (%) contentc 48.3 48.3 48.2 (48.0d)
Spanned gaps 402 402 1
Predicted Genes 13,322 13,826 14,164
Repetitive (%) 0.24 0.24 0.24
Transposable elements (%) 0.029 0.029 0.060
ENA project accession PRJNA13839 N/A PRJEB5475
  1. aincluding all scaffolds, N bases, and the mitochondria
  2. bincluding all scaffolds, N bases excluding the mitochondria
  3. cExcluding N’s and mitochondria
  4. dExcluding N’s, mitochondria and large repetitive sequence at the carboxyl end of chromosome