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Table 3 Basic statistics of the different reference and annotation versions of F. graminearum. A comparison of F. graminearum genome version statistics between BROAD, MIPS, and RRes

From: The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum

 

BROAD

MIPS

RRes

Genome size (bp)a

36,565,771

36,553,761

38,060,440

Scaffoldsb

31

19

5

GC (%) contentc

48.3

48.3

48.2 (48.0d)

Spanned gaps

402

402

1

Predicted Genes

13,322

13,826

14,164

Repetitive (%)

0.24

0.24

0.24

Transposable elements (%)

0.029

0.029

0.060

ENA project accession

PRJNA13839

N/A

PRJEB5475

  1. aincluding all scaffolds, N bases, and the mitochondria
  2. bincluding all scaffolds, N bases excluding the mitochondria
  3. cExcluding N’s and mitochondria
  4. dExcluding N’s, mitochondria and large repetitive sequence at the carboxyl end of chromosome
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BMC Genomics

ISSN: 1471-2164

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