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Table 1 Summary of read numbers and alignment based on the RNA-Seq data. C = control, S4 = challenged with Serratia proteamaculans, AS13 = challenged with Serratia plymuthica, R1, R2, R3 are three biological replicates

From: Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

Sample Total input reads Left mapped reads Left mapped reads with multiple alignments Right mapped reads Right mapped reads with multiple alignments Total aligned pairs Concordant pair alignment rate
C_R1 11,095,432 9,331,561 (84.1 %) 874,389 (9.4 %) 9,329,491 (84.1 %) 876,749 (9.4 %) 9,094,851 81.9 %
C_R2 11,494,727 9,617,041 (83.7 %) 860,263 (8.9 %) 9,616,430 (83.7 %) 862,125 (9.0 %) 9,363,011 81.4 %
C_R3 12,225,022 10,176,425 (83.2 %) 949,473 (9.3 %) 10,175,088 (83.2 %) 952,599 (9.4 %) 9,904,261 80.9 %
S4_R1 9,357,641 7,717,332 (82.5 %) 746,407 (9.7 %) 7,715,127 (82.4 %) 749,440 (9.7 %) 7,505,336 80.1 %
S4_R2 11,669,755 9,654,736 (82.7 %) 983,020 (10.2 %) 9,653,409 (82.7 %) 985,993 (10.2 %) 9,394,327 80.4 %
S4_R3 11,739,231 9,611,162 (81.9 %) 934,484 (9.7 %) 9,609,086 (81.9 %) 936,772 (9.7 %) 9,355,791 79.6 %
AS13_R1 12,188,851 10,163,886 (83.4 %) 1,032,695 (10.2 %) 10,160,009 (83.4 %) 1,034,346 (10.2 %) 9,893,969 81.1 %
AS13_R2 12,456,782 10,346,804 (83.1 %) 968,441 (9.4 %) 10,346,410 (83.1 %) 969,736 (9.4 %) 10,078,070 80.8 %
AS13_R3 12,277,378 10,116,891 (82.4 %) 945,375 (9.3 %) 10,115,612 (82.4 %) 951,473 (9.4 %) 9,856,584 80.2 %