Table 2 Top 20 upregulated genes of Rhizoctonia solani when challenged with Serratia proteamaculans S4 or Serratia plymuthica AS13
Gene Id | Putative function | log2 fold change |
|---|---|---|
S4 Up | Â | Â |
1.t002520 | aliphatic nitrilase | 6.92835 |
17.t000054 | betaine lipid | 6.91571 |
1.t001569 | l-psp endoribonuclease family protein | 6.39109 |
1.t001237 | dienelactone hydrolase family protein | 5.94347 |
11.t000148 | hypothetical protein RSOL_500330 | 5.92287 |
1.t001998 | mfs general substrate transporter | 5.89682 |
3.t000606 | response regulator receiver domain protein | 5.76394 |
4.t000541 | hypothetical protein RSOL_421740 | 5.71167 |
4.t000088 | kinase domain protein | 5.45440 |
4.t000274 | isocitrate lyase | 5.28342 |
1.t000080 | putative hydrolase | 5.26161 |
1.t003583 | epoxide hydrolase | 5.26161 |
6.t000086 | haloacid dehalogenase | 5.23554 |
1.t004221 | glutathione s-transferase c-terminal-like protein | 4.84274 |
5.t000634 | acyltransferase ctase cot cpt | 4.82218 |
1.t003262 | glutathione s-transferase | 4.82154 |
1.t000120 | tlc domain protein | 4.33277 |
1.t001973 | cytochrome p450 family protein | 4.24327 |
3.t000070 | secreted protein | 4.08181 |
12.t000229 | ricin b-like lectin | 4.05721 |
AS13 Up | Â | Â |
17.t000054 | betaine lipid | 7.56872 |
3.t000070 | secreted protein | 4.98602 |
1.t003006 | inorganic phosphate transporter | 4.74944 |
4.t000445 | ricin-type beta-trefoil lectin omain-containing protein | 4.52512 |
1.t000120 | tlc domain protein | 4.17569 |
1.t001562 | glycoside hydrolase family 13 protein | 4.10199 |
3.t000380 | nad h-binding family protein | 3.94301 |
1.t002656 | alpha amylase | 3.93229 |
2.t000151 | hypothetical protein RSOL_273340 | 3.90046 |
219.t000001 | helix loop helix dna-binding domain partial | 3.89048 |
1.t002794 | guanyl-specific ribonuclease f1 | 3.87433 |
10.t000302 | fad-binding domain protein | 3.75220 |
1.t001394 | plc-like phosphodiesterase | 3.53473 |
1.t002520 | aliphatic nitrilase | 3.51621 |
9.t000274 | hypothetical protein RSOL_481390 | 3.49204 |
4.t000274 | isocitrate lyase | 3.45076 |
5.t000433 | nad -binding protein | 3.44690 |
11.t000148 | hypothetical protein RSOL_500330 | 3.38336 |
1.t004152 | hypothetical protein RSOL_034560. partial | 3.37974 |
1.t004112 | gdsl-like lipase partial | 3.22982 |