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Table 3 Top 20 down-regulated genes of Rhizoctonia solani when challenged with Serratia proteamaculans S4 or Serratia plymuthica AS13

From: Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

Gene Id Putative function log2 fold change
S4 Down   
3.t000246 di-copper centre-containing protein −6.01495
15.t000002 endo- -beta-xylanase −3.89385
1.t002315 glycoside hydrolase family 61 protein −3.84167
1.t003360 duf1620-domain-containing protein −3.62845
1.t003607 carbohydrate-binding module family 1 partial −3.59128
2.t001565 tyrosinase tyrosinase: common central domain protein −3.23190
2.t001687 pci-domain-containing protein −3.23190
6.t000189 cytochrome p450 −3.10930
1.t003681 transmembrane partial −3.07966
4.t000240 cytochrome p450 family protein −3.02703
2.t000265 glycoside hydrolase family 5 protein −2.98684
6.t000299 pectinesterase short = pe −2.96204
6.t000302 pectinesterase short = pe −2.96204
2.t000715 glycoside hydrolase family 45 protein −2.91018
6.t000588 pectin lyase −2.90836
2.t000524 copper radical oxidase −2.83510
2.t001146 transmembrane protein. putative −2.68567
3.t000919 cytochrome p450 monooxygenase pc-bph −2.67932
3.t000100 isoamyl alcohol −2.65052
1.t003090 glycoside hydrolase −2.64223
AS13 Down   
3.t000246 di-copper centre-containing protein −3.33761
15.t000002 endo- -beta-xylanase −2.96027
1.t000495 f-box-like domain −2.67743
1.t002315 glycoside hydrolase family 61 protein −2.61483
1.t001349 di-copper centre-containing protein −2.55427
5.t000733 hypothetical protein RSOL_432000. partial −2.55164
2.t001565 tyrosinase tyrosinase: common central domain protein −2.45946
2.t001687 pci-domain-containing protein −2.45946
6.t000588 pectin lyase −2.45511
3.t000100 isoamyl alcohol −2.42676
6.t000189 cytochrome p450 −2.39924
3.t000448 alcohol oxidase −2.29475
1.t003607 carbohydrate-binding module family 1 partial −2.26637
6.t000134 gnat family −2.25863
2.t000714 glycoside hydrolase family 45 protein −2.21676
2.t001146 transmembrane protein. putative −2.20193
2.t000715 glycoside hydrolase family 45 protein −2.19200
4.t000240 cytochrome p450 family protein −2.16637
2.t001139 hypothetical protein RSOL_321070 −2.15247
2.t001148 hypothetical protein RSOL_321060 −2.15247