Table 3 Top 20 down-regulated genes of Rhizoctonia solani when challenged with Serratia proteamaculans S4 or Serratia plymuthica AS13
Gene Id | Putative function | log2 fold change |
|---|---|---|
S4 Down | Â | Â |
3.t000246 | di-copper centre-containing protein | −6.01495 |
15.t000002 | endo- -beta-xylanase | −3.89385 |
1.t002315 | glycoside hydrolase family 61 protein | −3.84167 |
1.t003360 | duf1620-domain-containing protein | −3.62845 |
1.t003607 | carbohydrate-binding module family 1 partial | −3.59128 |
2.t001565 | tyrosinase tyrosinase: common central domain protein | −3.23190 |
2.t001687 | pci-domain-containing protein | −3.23190 |
6.t000189 | cytochrome p450 | −3.10930 |
1.t003681 | transmembrane partial | −3.07966 |
4.t000240 | cytochrome p450 family protein | −3.02703 |
2.t000265 | glycoside hydrolase family 5 protein | −2.98684 |
6.t000299 | pectinesterase short = pe | −2.96204 |
6.t000302 | pectinesterase short = pe | −2.96204 |
2.t000715 | glycoside hydrolase family 45 protein | −2.91018 |
6.t000588 | pectin lyase | −2.90836 |
2.t000524 | copper radical oxidase | −2.83510 |
2.t001146 | transmembrane protein. putative | −2.68567 |
3.t000919 | cytochrome p450 monooxygenase pc-bph | −2.67932 |
3.t000100 | isoamyl alcohol | −2.65052 |
1.t003090 | glycoside hydrolase | −2.64223 |
AS13 Down | Â | Â |
3.t000246 | di-copper centre-containing protein | −3.33761 |
15.t000002 | endo- -beta-xylanase | −2.96027 |
1.t000495 | f-box-like domain | −2.67743 |
1.t002315 | glycoside hydrolase family 61 protein | −2.61483 |
1.t001349 | di-copper centre-containing protein | −2.55427 |
5.t000733 | hypothetical protein RSOL_432000. partial | −2.55164 |
2.t001565 | tyrosinase tyrosinase: common central domain protein | −2.45946 |
2.t001687 | pci-domain-containing protein | −2.45946 |
6.t000588 | pectin lyase | −2.45511 |
3.t000100 | isoamyl alcohol | −2.42676 |
6.t000189 | cytochrome p450 | −2.39924 |
3.t000448 | alcohol oxidase | −2.29475 |
1.t003607 | carbohydrate-binding module family 1 partial | −2.26637 |
6.t000134 | gnat family | −2.25863 |
2.t000714 | glycoside hydrolase family 45 protein | −2.21676 |
2.t001146 | transmembrane protein. putative | −2.20193 |
2.t000715 | glycoside hydrolase family 45 protein | −2.19200 |
4.t000240 | cytochrome p450 family protein | −2.16637 |
2.t001139 | hypothetical protein RSOL_321070 | −2.15247 |
2.t001148 | hypothetical protein RSOL_321060 | −2.15247 |