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Table 2 Comparison between small RNA and the Cymbidium transcriptome

From: Characterization and comparative profiling of the small RNA transcriptomes in two phases of flowering in Cymbidium ensifolium

Sample

Total sRNA

Mapped sRNA

" + " Mapped sRNA

"-" Mapped sRNA

Reads

Percent

Reads

Percent

Reads

Percent

Reads

Percent

PS1A

5,629,134

(100.00 %)

2,807,112

(49.87 %)

2,044,383

(36.32 %)

762,729

(13.55 %)

PS1B

8,378,994

(100.00 %)

3,605,560

(43.03 %)

2,570,495

(30.68 %)

1,035,065

(12.35 %)

PS4A

6,512,965

(100.00 %)

2,456,095

(37.71 %)

1,692,808

(25.99 %)

763,287

(11.72 %)

PS4B

7,949,543

(100.00 %)

2,898,190

(36.46 %)

1,964,994

(24.72 %)

933,196

(11.74 %)

  1. “+” Mapped sRNA: reads were mapped to reference sequences in the same orientation
  2. “-” Mapped sRNA: reads were mapped to reference sequences in the reverse orientation
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BMC Genomics

ISSN: 1471-2164

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