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Fig. 2 | BMC Genomics

Fig. 2

From: Quantitative proteomic analysis of formalin–fixed, paraffin–embedded clear cell renal cell carcinoma tissue using stable isotopic dimethylation of primary amines

Fig. 2

Quantitative proteomic comparison of identical samples that were split, labeled by reductive dimethylation with either light (12COH2) or heavy (13COD2) formaldehyde, and mixed 1:1. Box-and-whisker plots denote the 25–75 percentile and the 5 – 95 percentile, respectively. Data represents average values ± standard deviation; based on the analysis of three proteome samples from solid tumors. Protein and peptide identification numbers are 572 proteins/4528 unique peptides for cryo-sample 1; 637 proteins/4627 unique peptides for cryo-sample 2; 605 proteins/4763 unique peptides for cryo-sample 3; 647 proteins/4977 unique peptide for FFPE-sample 1; 564 proteins/4113 unique peptides for FFPE-sample 2; 601 proteins/4367 unique peptides for FFPE sample 3

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