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Table 3 Pfam keywords for N. vitripennis and S. invicta expanded and contracted protein families

From: Trends in genome dynamics among major orders of insects revealed through variations in protein families

Family Size # Prot. Pfam ID Pfam Name P-value E/Ca Species
1860 227 PF12796 Ankyrin repeats (3 copies) 1.00E-307 E N. vitripennis
63 22 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 1.00E-307 E N. vitripennis
14 14 PF00076 RNA recognition motif. (RRM, RBD, or RNP domain) 1.00E-307 E N. vitripennis
33 16 PF10551 MULE transposase domain 1.00E-307 E N. vitripennis
58 48 PF12259 Protein of unknown function (DUF3609) 1.00E-307 E N. vitripennis
50 29 PF00665 Integrase core domain 1.00E-307 E N. vitripennis
42 24 PF12596 87 kDa Transposase 1.00E-307 E S. invicta
57 25 PF05699 hAT family dimerisation domain 1.00E-307 E S. invicta
14 11 PF00698 Acyl transferase domain 1.00E-307 E S. invicta
464 65 PF13359 DDE superfamily endonuclease 1.00E-307 E S. invicta
85 27 PF00348 Polyprenyl synthetase 1.00E-307 E S. invicta
67 26 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 1.00E-307 E S. invicta
69 32 PF03184 DDE superfamily endonuclease 1.00E-307 E S. invicta
865 0 N/A   3.28E-26 C N. vitripennis
795 1 N/A   2.17E-22 C N. vitripennis
4952 196 N/A   1.03E-15 C N. vitripennis
1048 7 N/A   2.60E-15 C S. invicta
2912 62 PF00089 Trypsin 2.72E-15 C S. invicta
399 0 N/A   1.80E-12 C N. vitripennis
1667 29 PF00379 Insect cuticle protein 3.97E-12 C S. invicta
243 51 PF02949 7tm Odorant receptor 2.21E-11 E S. invicta
67 28 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 2.47E-11 E N. vitripennis
80 29 PF05585 Putative peptidase (DUF1758) 4.04E-11 E N. vitripennis
865 8 N/A   4.35E-11 C S. invicta
295 150 PF05380 Pao retrotransposon peptidase 9.09E-11 E N. vitripennis
  1. Only families with P-value < E-10 are listed. Bold, annotations related to TNAP. aE/C refers to an expanded or a contracted family