Table 5 Predicted miR-29b and miR-223 binding of human and rat orthologs to the validated zebrafish genes
Zfish refseq | Zfish ensembl | Zebrafish gene | Human ortholog (context score)a | Rat ortholog (context score)a |
|---|---|---|---|---|
NM_001076587 | ENSDART00000087565 | eva1a | miR-29b (−0.21) | miR-223 (−0.32) |
XM_688304 | ENSDART00000050945 | layna | miR-223 (−0.41) | miR-29b (−0.14) |
miR-223 (−0.05) | ||||
NM_001123280 | ENSDART00000064163 | nefmb | No direct ortholog | No direct ortholog |
NEFH: miR-223 (−0.25) | ||||
NM_199534 | ENSDART00000018351 | ina | miR-29b (−0.17) | miR-29b (−0.15) |
XM_685557 | ENSDART00000021556 | si:ch211-51a6.2 | No direct ortholog | - |
PRSS12: miR-223 (−0.08) | ||||
NM_001201393 | ENSDART00000126365 | smoc1 | miR-223 (−0.11) | miR-223 (−0.11) |
XM_003201552 | ENSDART00000124670 | lrrn3 | - | - |
XM_003199845 | ENSDART00000081039 | sb:cb252 | No ortholog | No ortholog |