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Table 1 Accession numbers of retrieved contigs sequences obtained from plant genome databases. The number of introns of hop and chl-fus genes, respectively, is given in arabic numbers

From: Recombination of chl-fus gene (Plastid Origin) downstream of hop: a locus of chromosomal instability

Family

Species

Introns

Genbank Accession numbers

CHLOROPHYTA

   

Mamiellaceae

Micromonas sp. RCC299

1-1

XP_002500383; XP_002500081

 

Ostreococcus lucimarinus

0-1

XP_001418158; XP_001419031

 

Ostreococcus tauri

0-1

XM_003079642; XM_003080500

Chlamydomonadaceae

Chlamydomonas reinhardtii

12-9

XP_001691869; XM_001701793

GYMNOSPERMS

   

Funariaceae

Physcomitrella patens

8-6

NW_001865607; XP_001784483

Pinaceae

Picea abies

8-3

MA_10426940; MA_10431292(*)

   

(*) Dendrome Project

MONOCOTS

   

Musaceae

Ensete ventricosum

6-3

AMZH01008475; AMZH01015354

Poaceae

Brachypodium distachyon

6-3

NC_016135

 

Oryza glaberrima

6-3

ADWL01008993

 

Oryza sativa

6-3

CM000129

 

Setaria italica

6-3

NW_004675967

 

Sorghum bicolor

6-3

NC_012875

 

Zea mays

6-3

GK00032

Arecaceae

Elaeis guineensis

6-3

ASJS01002389-94

 

Phoenix dactylifera

6-3

ATBV01012962

DICOTS

   

Cucurbitaceae

Citrullus lanatus

6-3

AGCB01004585; AGCB01006484

 

Cucumis melo

6-3

CAJI01012439; CAJI01003926

 

Cucumis sativus

6-3

XM_004147890; XM_004147564

Cannabaceae

Cannabis sativa

6-3

AGQN01077260

Moraceae

Morus notabilis

6-3

ATGF01007958

Rosaceae

Fragaria vesca subsp vesca

6-3

NC_020495

 

Malus domestica

6-3

ACYM01058960

 

Prunus mume

6-3

AOHF01010810

 

Prunus persica

6-3

AEKV01005456

 

Pyrus x bretschneideri

6-3

AJSU01026097

Fabaceae

Cajanus cajan

6-3

AGCT01009484-85

 

Cicer arietinum

6-3

XM_00451602; XM_004515686

 

Glycine max

6-3

XP_003549898

 

Lupinus angustifolius

6-3

AOCW01121688; AOCW01054016

 

Medicago truncatula

6-3

NC_016411; NC_016410

Euphorbiaceae

Hevea brasiliensis

6-3

AJJZ010763885

 

Jatropha curcas

6-3

BABX02001448

 

Ricinus communis

6-3

NW_002994274

Linaceae

Linum usitatissimum

6-3

AFSQ01027627-29

Salicaceae

Populus trichocarpa

6-3

NC_008469

Malvaceae

Gossypium raimondii

6-3

AMOP01022205

 

Theobroma cacao

6-3

CACC01007881

Brassicaceae

Aethionema arabicum

5-3

ASZG01007785

 

Arabidopsis lyrata

6-3

NW_003302554

 

Arabidopsis thaliana

6-3

NC_003070

 

Brassica rapa

6-2

AENI01007476

 

Capsella rubella

6-3

ANNY01000463

 

Eutrema parvulum

6-3

AFAN01000006

Eutrema salsugineum

6-3

AHIU01002482

Leavenworthia alabamica

6-3

ASXC010000179

Sisymbrium irio

6-3

ASZH01019437

Caricaceae

Carica papaya

6-3

ABIM01007984

Rutaceae

Citrus sinensis

6-3

AJPS01000059

Vitaceae

Vitis vinifera

6-3

AM459130

Solanaceae

Nicotiana sylvestris

6-3

ASAF01010839-40

Nicotiana tomentosiformis

6-3

ASAG01110979

Solanum lycopersicum

6-3

AP009300

Solanum tuberosum

6-3

AEWC01024049

  1. (*) mean that MA_10426940 and MA_10431292 sequences were retrieved from Dendrome Project