Fig. 5

HyLIMP sequences. HyLIMP #4 which interrupts RNA-Seq coverage is boxed. Palindromes are underlined, and the reported ΔG value is for the RNA form of the palindromic sequence. In the sequences, the repeat units common with LIMPs are written in red, the other pentanucleotide in blue and the conserved inner part of the palindrome in green. Residues differing from the consensus are italicized. The region in HyLIMP #3 that is identical to the LIMP loop is highlighted in yellow