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Table 1 Families of interspersed DNA repeats identified in the L. incisa mitochondrial genome

From: The complete mitochondrial genome sequence of the green microalga Lobosphaera (Parietochloris) incisa reveals a new type of palindromic repetitive repeat

Repeat name

# of copies

Consensus sequencea

Notes

LIMP

19

(AACCA) m [AATGAAA or TTTCATT](TGGTT) n

Repetitive palindrome; 2 ≤ (m,n) ≤13

Repeat_2

16

GCCTGTACAAATCTCTGCCCAACCGTAATGAAATGGTTGGCAAAAGAAAAAGAAATGGTGAGAGTAATCAAATGGTTGGCTC

Three copies interrupted by a LIMP; four copies next to LIMPs

Repeat_3

6

CCAGTTAAAATGAATGGCAAAAAACAAATGGTTGG

 

Repeat_4

8

CTCCACACCATTTCATTAATCTCTGATTTGTTCA

 

Repeat_5

7

TTTGGTTTGGTTTGGTTACAAATCAGAGAAAAGCAGGGGCTC

Six copies overlapping LIMPs

Repeat_6

5

TTACGGTTGGGCAGAGAAAAAAGGCAACCGTGAAAAAAAAAGCTGCGGT

three copies overlapping LIMPs

Repeat_7

5

AATCTCTGATTTGTTCAGGAACAACTGGTTGGG

All copies adjacent to LIMPs

  1. apalindromic positions are underlined