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Table 6 Genomic regions containing chromosome rearrangements between 6B and its homologous chromosomes in other species

From: A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B

Wheat chromosome 6B

Wheat chromosome 6B

Rearrangement

Rice chromosome 2

B. distachyon chromosome 3

Sorghum chromosome 4

(position on RH map)

(estimated size a)

(size)

(size)

(size)

6BS: 188.3–226.9 Mb

6BS: 355.7–422.8cR

Inversion

Os02g0169900-Os02g0184500

Bradi3g05260.1-Bradi3g06250.1

Sb04g004700.1-Sb04g005730.1

(355.7–422.8cR)

(41.9 Mb)

(0.93 Mb)

(0.85 Mb)

(1.1 Mb)

6BS: 230.2–267.1 Mb

6BS: 424.0–511.9cR

Inversion

Os02g0185500-Os02g0200000

Bradi3g06260.1-Bradi3g07370.1

Sb04g005790.1-Sb04g006830.1

(424.0–511.9cR)

(40.4 Mb)

(0.84 Mb)

(0.94 Mb)

(1.2 M)

6BL: 516.9–555.0 Mb

6BL: 1205.7–1286.0cR

Inversion

Os02g0644100-Os02g0680400

Bradi3g50100.1-Bradi3g51730.1

 

(1205.7–1286.0cR)

(43.8 Mb)

(1.9 Mb)

(1.4 Mb)

6BL: 632.1–650.0 Mb

6BL: 1400.4–1432.3cR

Inversion

Os02g0739000-Os02g0751800

  

(1400.4–1432.3cR)

(22.3 Mb)

(0.73 Mb)

6BL: 602.5–713.8 Mb

6BL: 1373.4–1479.1cR

Translocation (inversion)

 

Bradi3g56180.1-Bradi3g60210.1

 

(1373.4–1479.1cR)

(98.8 Mb)

(3.0 Mb)

6BL: 715.8–786.4 Mb

6BL: 1494.5–1545.2cR

Translocation

 

Bradi3g52910.1-Bradi3g56110.1

 

(2.4 Mb)

(1494.5–1545.2cR)

(70.6 Mb)

6BL: 516.9–555.0 Mb

6BL: 1205.7–1286.0cR

Translocation

  

Sb04g031850.1-Sb04g033430.1

(1205.7–1286.0cR)

(43.8 Mb)

(1.6 Mb)

6BL: 559.5–630.8 Mb

6BL: 1293.0–1398.2cR

Inversion

  

Sb04g028600.1-Sb04g031680.1

(1293.0–1398.2cR)

(72.4 Mb)

(2.9 Mb)

6BL: 632.1–650.0 Mb

6BL: 1400.4–1432.3cR

Translocation

  

Sb04g027710.1-Sb04g028500.1

(1400.4–1432.3cR)

(22.3 Mb)

(0.96 Mb)

  1. aThe size of the genomic region on chromosome 6B is estimated based on the cumulative size of the BAC contigs positioned in the corresponding RH map region