Table 2 GO Biological Processes significantly enriched in contigs up-regulated in the resistant pool compared to the sensitive pool and in the sensitive pool compared to the resistant pool
Resistant Pool/sensitive | Sensitive Pool/resistant | ||||
|---|---|---|---|---|---|
Enrichment in contigs up-regulated over the whole time-course | |||||
GO.ID | Term | p-value | GO.ID | Term | p-value |
GO:0006278 | RNA-dependent DNA replication | 0.00063 (***) | GO:0006950 | Response to stress | 0.008 (**) |
GO:0006952 | Defence response | 0.01069 (*) | GO:0006468 | Protein amino acid phosphorylation | 0.015 (*) |
GO:0051258 | Protein polymerization | 0.02974 (*) | GO:0006979 | Response to oxidative stress | 0.026 (*) |
GO:0009664 | Plant-type cell wall organization | 0.03267 (*) | GO:0032196 | Transposition | 0.028 (*) |
GO:0006950 | Response to stress | 0.04763 (*) | GO:0043687 | Post-translational protein modification | 0.028 (*) |
| Â | Â | Â | GO:0016310 | Phosphorylation | 0.029 (*) |
| Â | Â | Â | GO:0006793 | Phosphorus metabolic process | 0.038 (*) |
| Â | Â | Â | GO:0006952 | Defence response | 0.042 (*) |
| Â | Â | Â | GO:0006464 | Protein modification process | 0.043 (*) |
Enrichment in contigs up-regulated in all herbicide-treated modalities | |||||
GO:0006952 | Defence response | 0.00012 (***) | GO:0006313 | Transposition, DNA-mediated | 0.00039 (***) |
GO:0006278 | RNA-dependent DNA replication | 0.00091 (***) | GO:0006950 | Response to stress | 0.01159 (*) |
GO:0051258 | Protein polymerization | 0.03208 (*) | GO:0006468 | Protein amino acid phosphorylation | 0.0252 (*) |
GO:0009664 | Plant-type cell wall organization | 0.03524 (*) | GO:0050896 | Response to stimulus | 0.02964 (*) |
| Â | Â | Â | GO:0006979 | Response to oxidative stress | 0.03143 (*) |
| Â | Â | Â | GO:0043687 | Post-translational protein modification | 0.04534 (*) |
| Â | Â | Â | GO:0016310 | Phosphorylation | 0.04692 (*) |