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Table 1 Summary of sequencing and assembly data

From: RNA-Seq in Mytilus galloprovincialis: comparative transcriptomics and expression profiles among different tissues

Sequencing statistics Hemocytes Mantle Muscle Gill
Millions of raw reads 112.706 111.322 113.045 56.244
Millions of clean reads 107.386 106.060 107.127 53.335
Total Megabases 9,665 9,545 9,641 4,800
% GC content 38.99 % 38.32 % 38.28 % 37.54 %
Assembly statistics     
Number of contigs 261,332 428,939 313,554 238,650
Tissue unigenes 107,045 131,935 120,572 120,254
  All
Total number of transcripts 151,320
Average transcript length 570
N50 transcript length 774
Range of transcript lengths 200 – 17,690
Number of transcripts < 500pb 104,757
Number of transcripts > 500pb 46,563
Annotation statistics  
Annotated transcripts by nt 14,207 (9.4 %)
Annotated transcripts by nr 45,182 (29.8 %)
Annotated transcripts by SwissProt 36,656 (24.2 %)
Annotated transcripts by KEGG 31,144 (20.6 %)
Annotated transcripts by COG 14,503 (9.6 %)
TOTAL annotated transcripts 50,998 (33.7 %)
Transcripts with GO terms 18,899 (12.5 %)