Sequencing statistics | Hemocytes | Mantle | Muscle | Gill |
---|---|---|---|---|
Millions of raw reads | 112.706 | 111.322 | 113.045 | 56.244 |
Millions of clean reads | 107.386 | 106.060 | 107.127 | 53.335 |
Total Megabases | 9,665 | 9,545 | 9,641 | 4,800 |
% GC content | 38.99Â % | 38.32Â % | 38.28Â % | 37.54Â % |
Assembly statistics | Â | Â | Â | Â |
Number of contigs | 261,332 | 428,939 | 313,554 | 238,650 |
Tissue unigenes | 107,045 | 131,935 | 120,572 | 120,254 |
 | All | |||
Total number of transcripts | 151,320 | |||
Average transcript length | 570 | |||
N50 transcript length | 774 | |||
Range of transcript lengths | 200 – 17,690 | |||
Number of transcripts < 500pb | 104,757 | |||
Number of transcripts > 500pb | 46,563 | |||
Annotation statistics | Â | |||
Annotated transcripts by nt | 14,207 (9.4Â %) | |||
Annotated transcripts by nr | 45,182 (29.8Â %) | |||
Annotated transcripts by SwissProt | 36,656 (24.2Â %) | |||
Annotated transcripts by KEGG | 31,144 (20.6Â %) | |||
Annotated transcripts by COG | 14,503 (9.6Â %) | |||
TOTAL annotated transcripts | 50,998 (33.7Â %) | |||
Transcripts with GO terms | 18,899 (12.5Â %) |