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Table 5 Top 25 differentially expressed transcripts

From: RNA-Seq in Mytilus galloprovincialis: comparative transcriptomics and expression profiles among different tissues

FC Hemocyte top 25 expressed FC Mantle top 25 expressed
1,820 Mytilin B 5,008 Usherin
750 Procollagen type VI alpha 4 2,702 Mitochondrial glycine cleavage system H prot
744 Metallothionein MT-20 2,521 BMSP / Protein PIF
709 C-type lectin 1,992 MAM dom-cont glycosylphosphatidylinositol anchor protein 2
685 Disintegrin and metalloproteinase with thrombospondin motifs 16 (ADAMTS16) 1,951 Protocatechuate 3,4-dioxygenase beta subunit
588 Cystatin-A-like 1,795 Collagen alpha-1, IV/III
530 Melatonin receptor-like (1A/1B) 1,758 Keratin, type II cytoskeletal 2 epidermal
508 Nacre protein 1,618 Fibroin heavy chain
478 Defensin 2b (MGD2b) 1,552 ATP-dependent RNA helicase A
465 C1q domain containing protein 1,541 Endo-1,4-mannanase
428 Mytilin-6 1,489 Heterogeneous nuclear ribonucleoprotein A3
407 Spermine oxidase 1,489 Mytimycin
383 Gly, Ala and Asn-rich protein 1,489 Splicing factor 3A subunit 2
357 Apextrin-like protein (apelP) 1,409 L-rhamnose-binding lectin CSL3
320 Mucin-2 1,389 Sarcoplasmic calcium-binding protein
296 Mytilin-7 1,314 Protein diaphanous
269 Macrophage mannose receptor 1-like 1,314 Vitellogenin 6
260 Serine protease inhibitor Cvs.i-2 1,261 Fibronectin 3
258 MAC/perforin- and kringle-dom-cont prot 1,218 Heat shock protein 70
252 Peptide O-xylosyltransferase 1,193 Whey acidic protein-like
251 MAM and LDL-receptor class A dom-cont prot 1,184 Porin-like
246 Heat shock protein 70 1,184 Hornerin / filaggrin
242 Myticin-A 1,168 Chitinase 3
241 Interferon alpha-inducible protein 27 2B (IFI27/ISG12) 1,144 Protein unc-93 homolog A
237 Inhibitor of apoptosis 7B/2/3 1,136 TPA: SCO-spondin protein
FC Muscle top 25 expressed FC Gill top 25 expressed
2,702 Collagen alpha-3/6(VI) chain 3,083 Inner centromere protein A
1,226 Myosin heavy chain 2,837 BMSP / protein PIF
1,128 Heat shock protein 70 2,817 Perlucin
861 Collagen pro alpha-chain 2,592 Caveolin-1/3
787 C1q domain containing protein 2,120 Peptide O-xylosyltransferase
776 Tripartite motif-containing protein 2/56 (TRIM2/56) 2,048 Endonuclease domain-containing 1 protein
695 Proteoglycan 4 1,872 Insulin-like growth factor binding protein 2b
690 Protein LEA-1 1,833 Fibrinogen-related protein 7
662 Sushi, VWF type A, EGF and pentraxin dom-cont prot 1 (SVEP1) 1,771 Synaptotagmin
657 Beta-glucanase/Beta-glucan synthetase 1,734 Collagen alpha-1(X) chain-like
644 Enzymatic glycosylation-regulating-like 1,722 LDL receptor-related protein 8 (LRP8)
553 Fatty acid-binding protein homolog 9/7 1,652 Suppressor of tumorigenicity 14 protein (ST14)
530 Nucleolar protein 12 1,552 Antistasin
488 Forkhead box L2 1,479 Collagen triple helix repeat protein
481 Obscurin 1,458 LPS binding protein / Bactericidal permeability-increasing protein
471 Calmodulin 1,305 Viral A-type inclusion protein repeat
471 Dynein light chain 1 1,269 Big defensin
465 Angiopoietin-4 1,269 Notch gene homolog 3-like
465 GTP-binding protein REM 1 1,261 Alpha 1 type V collagen
461 Synaptopodin 2 1,243 Golgin subfamily A member 4
458 Myosin light chain 1,243 Apextrin-like protein
452 Calpain-5 1,235 Short-chain collagen C4
443 Plasminogen 1,209 Dermatopontin 2
440 Paramyosin 1,184 Stanniocalcin
428 BTB/POZ domain-containing protein KCTD7 1,160 Tolloid-like 1 precursor (TLL1)
  1. FC fold change