CP21 | CP220 | CPt10 | IBB_35a | |
---|---|---|---|---|
Family | Myoviridae | Myoviridae | Myoviridae | Myoviridae |
Head diameter (nm) | 93 | 96 | n.a. | 100 |
Tail dimensions (nm) | 135 × 24 | 110 × 16 | n.a. | 140 × 17 |
Host species | C. jejuni, C. coli | C. jejuni, C. coli | C. jejuni, C. coli | C. jejuni, C. coli |
Genome size according to PFGE (kb) | 209 | 197 | 176 | 204 |
Genomic sequence (bp) | 182,761 | 177,493 | 175,720 | 172,065 |
G + C content (%) | 27.2 | 27.4 | 27.3 | 27.4 |
Total no. of ORFs | 220 | 194 | 201 | 210 |
Forward strand | 91 | 173 | 180 | n.a.b |
Reverse strand | 129 | 21 | 21 | n.a.b |
Coding density (%) | 88.2 | 88.4 | 89.7 | 90.0 |
Gps with predicted function | 78 (35 %) | 74 (38 %) | 70 (35 %) | 84 (40 %) |
Transcription terminators | 13 | 11 | 9 | 14 |
tRNAs | 2 (Thr, Pro) | 2 (Arg, Tyr) | 2 (Arg, Tyr) | 2 (Arg, Tyr) |
Homing endonucleases | 3 | 1 | 1 | 3 |
Transposases | 5 | 4 | 2 | 2 |
T4-related proteins | 32 | 39 | 34 | 35 |
SAM-related proteins | 8 | 11 | 12 | 6 |
Genome structure | Linear | Linear | Linear | n.a. |
Sequence state | Complete | Complete | Complete | Incompletea |
Accession number | NC019507.1 | FN667788 | FN667789 | C1:HM246720 |
C2:HM246721 | ||||
C3:HM246722 | ||||
C4:HM246723 | ||||
C5:HM246724 | ||||
Reference | [23] | [11] | [11] | [22] |