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Table 4 Bacteriophage DLP2 genome annotation

From: The isolation and characterization of two Stenotrophomonas maltophilia bacteriophages capable of cross-taxonomic order infectivity

Gene Start End Putative function Strand Length (AA) Homologue Percent identity Source GenBank accession number
1 1 255 Hypothetical protein + 84 Phage protein found in lysis cassettes 96 PA25 YP_006299865.1
2 252 518 Holin + 88 Holin 95 PA25 YP_006299866.1
3 511 1056 Endolysin + 181 ORF003 100 PA73 YP_001293410.1
4 1068 1373 Rz + 101 Rz 100 Ab26 YP_009044338.1
5 1288 1569 Rz1 + 93 Rz1 100 Ab26 YP_009044339.1
6 1627 2115 Small terminase + 162 Small terminase 100 PA25 YP_006299870.1
7 2096 3691 Large terminase + 531 Large terminase 99 Ab26 YP_009044341.1
8 3705 5210 Portal protein + 501 Portal protein 99 Ab26 YP_009044342.1
9 5222 6316 F-like head morphogenesis protein + 364 F-like head morphogenesis protein 99 Ab26 YP_009044343.1
10 6353 7072 Scaffold protein + 239 Scaffold protein 98 PA25 YP_006299874.1
11 7075 8052 Major capsid protein + 325 ORF010 99 PA73 YP_001293417.1
12 8122 8526 Hypothetical protein + 134 ORF011 99 PA73 YP_001293418.1
13 8592 8963 Hypothetical protein + 123 ORF012 98 PA73 YP_001293419.1
14 8976 9494 Hypothetical protein + 172 Virion protein 100 PA25 YP_006299878.1
15 9498 9878 Head-tail joining protein + 126 Virion protein 98 Ab26 YP_009044349.1
16 9875 10,330 Minor tail protein + 151 ORF015 99 PA73 YP_001293422.1
17 10,343 11,878 Major tail tube protein + 511 Major tail tube protein 99 PA25 YP_006299881.1
18 11,942 12,370 Tail chaperonin + 142 Tail chaperonin 99 Ab26 YP_009044352.1
19 12,379 12,735 Tail chaperonin + 114 Tail chaperonin 99 Ab26 YP_009044353.1
20 12,704 13,138 Hypothetical protein + 144 ORF019 100 PA73 YP_001293426.1
21 13,144 16,711 Tape measure protein + 1187 Tape measure protein 99 PA25 YP_006299885.1
22 16,709 17,671 Hypothetical protein + 320 Virion protein 88 PA25 YP_006299886.1
23 17,671 18,636 Hypothetical protein + 321 Virion protein 64 PA25 YP_006299887.1
24 18,642 20,354 Hypothetical protein + 570 Virion protein 96 PA25 YP_006299888.1
25 20,354 21,178 Hypothetical protein + 274 Virion protein 99 PA25 YP_006299889.1
26 21,182 23,623 Central tail hub + 813 Central tail hub 99 PA25 YP_006299890.1
27 23,624 25,675 DNA polymerase - 683 DNA polymerase 99 PA25 YP_006299891.1
28 25,687 26,829 Replicative clamp - 380 Replicative clamp 97 PA25 YP_006299892.1
29 26,813 27,040 Hypothetical Protein - 76 KAK25_00029 100 PA25 YP_006299893.1
30 27,045 28,700 DEAD box helicase - 551 DEAD box helicase 99 Ab26 YP_009044363.1
31 28,693 29,790 RecB exonuclease - 365 RecB exonuclease 99 Ab26 YP_009044364.1
32 29,959 30,120 Hypothetical protein - 53 KAK25_00032 100 PA25 YP_006299896.1
33 30,302 31,054 Hypothetical protein - 251 Member of DUF669 phage protein family 99 PA25 YP_006299897.1
34 31,113 31,829 Rec A - 238 RecA 100 Ab26 YP_009044366.1
35 31,884 32,324 Hypothetical protein - 146 Hypothetical protein 99 Ab26 YP_009044367.1
36 32,401 32,958 MazG - 185 MazG 98 Ab26 YP_009044368.1
37 33,078 33,284 Transcriptional regulator + 68 Hypothetical protein 99 Ab26 YP_009044369.1
38 33,274 35,595 Replicative Primase/Helicase + 773 Replicative primase/helicase 99 PA25 YP_006299902.1
39 35,741 36,193 Hypothetical protein + 150 MAM_066 54 ΦMAM1a YP_007349045.1
40 36,281 36,430 Hypothetical protein + 49 KAK25_00040 69 PA25 YP_006299904.1
41 36,764 36,955 Hypothetical protein + 63 ORF038 94 PA73 YP_001293445.1
42 36,952 37,248 Hypothetical protein + 98 ORF039 100 PA73 YP_001293446.1
43 37,269 37,424 Hypothetical protein + 59 Hypothetical protein 92 Ab26 YP_009044375.1
44 37,399 37,641 Hypothetical protein + 80 ORF040 99 PA73 YP_001293447.1
45 37,748 37,945 Hypothetical protein + 73 X805_23910 58 DSM 6575b KDB52021.1
46 37,993 38,367 Hypothetical protein + 124 KAK25_00046 97 PA25 YP_006299910.1
47 38,428 38,649 Hypothetical protein + 73 KAK25_00047 99 PA25 YP_006299911.1
48 38,646 39,182 Vsr endonuclease + 178 KAK25_00048 100 PA25 YP_006299912.1
49 39,170 39,385 Hypothetical protein + 71 Hypothetical protein 100 Ab26 YP_009044380.1
50 39,382 39,561 Hypothetical protein + 59 KAK25_00050 98 PA25 YP_006299914.1
51 39,622 39,927 Hypothetical protein + 101 ORF045 100 PA73 YP_001293452.1
52 39,944 40,234 Hypothetical protein + 96 ORF046 99 PA73 YP_001293453.1
53 40,227 40,460 Hypothetical protein + 77 KAK25_00053 99 PA25 YP_006299917.1
54 40,531 40,698 Hypothetical protein + 55 ORF048 100 PA73 YP_001293455.1
55 40,689 41,156 dCMP deaminase + 145 dCMP deaminase 97 PA25 YP_009044383.1
56 41,162 41,545 Hypothetical protein + 127 ORF050 100 PA73 YP_001293457.1
57 41,580 41,789 Hypothetical protein + 69 ORF051 100 PA73 YP_001293458.1
58 41,873 42,445 Hypothetical protein + 190 ORF052 99 PA73 YP_001293459.1
  1. a Serratia phage ΦMAM1
  2. b Sphaerotilus natans subsp. natans DSM 6575
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