Fig. 3From: RNAseq expression analysis of resistant and susceptible mice after influenza A virus infection identifies novel genes associated with virus replication and important for host resistance to infectionCorrelation of expression levels and infectious particles. The part below the diagonal represents Spearman pairwise correlation factors in percent as pie charts; the part above the diagonal shows scatter plots for pairwise comparisons of RPKM and FFU in C57BL/6J and DBA/2J mice. For C57BL/6J mice, RPKM values from mock day3 and from days 1 to 14 p.i., and for DBA/2J, RPKM values from mock day 3 and days 1 to 5 p.i. were used for the analysis. Data were ordered by day, +1 added and then log2 transformed. FFU were taken from [15], offset by 1 and log2 transformed. Pearson pairwise correlations between RPKM and FFU for C57BL/6J were: corr = 0.8999419, p-value = 3.676e-07; and for DBA/2J: cor = 0.8832289, p-value = 0.0001401Back to article page