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Fig. 4 | BMC Genomics

Fig. 4

From: RNAseq expression analysis of resistant and susceptible mice after influenza A virus infection identifies novel genes associated with virus replication and important for host resistance to infection

Fig. 4

Expression changes of DEG genes overlapping with previously identified genes required for viral replication. The heatmap illustrates DEG genes from infected C57BL/6J and DBA/2J that overlap with previously identified genes [19]. Mean expression differences of DEG genes from infected C57BL/6J and DBA/2J at days 3 and 5 p.i. to mock-treated samples were calculated and values were scaled by rows. Colors display z-scores from −1.5 (dark green) to 1.5 (red) for normalized gene expression values. Rows: name of genes, columns: difB6d1: difference in expression levels of C57BL/6J infected mice at day 1 compared to mock day 1 treated animals; difB6d3 to difB6d14: difference in expression levels of C57BL/6J infected mice at days 3, 5, 8, 15 p.i. compared to mock-treated day 3 animals; difD2d1: difference in expression levels of DBA/2J infected mice at day 1 compared to mock-treated day 1 animals; difD2d3 to difD2d5: difference in expression levels of DBA/2J mice infected at days 3, 5 p.i. compared to mock-treated day 3 animals

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BMC Genomics

ISSN: 1471-2164

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