Table 1 Characteristics of SNPs tested in soybean landraces and improved lines
From: Genomic consequences of selection and genome-wide association mapping in soybean
Population | MAFb | Genetic diversity | Haplotype blocks | Extent of LD decay (kb) | ||||
|---|---|---|---|---|---|---|---|---|
>0.01 | >0.05 | A i | H i | No. | Size (kb) | Max. | Average | |
Landraces (342a) | 38,453 | 35,708 | 81,034 | 0.33 | 5513 | 105 | 427 | 187.8 |
Improved lines (1062) | 35,189 | 30,651 | 72,226 | 0.23 | 3180 | 245 | 430 | 233.6 |