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Table 1 Summary of sequences analysis

From: De novo transcriptome sequencing and comprehensive analysis of the drought-responsive genes in the desert plant Cynanchum komarovii

Sample Raw reads Clean reads Clean bases Error (%) Q20 (%) Q30 (%) GC Content (%)
CK_1_1 34,754,202 33,279,869 3.33G 0.03 97.38 91.84 43.12
CK_1_2 34,754,202 33,279,869 3.33G 0.04 96.52 90.36 43.16
CK_2_1 37,597,921 35,233,977 3.52G 0.03 97.44 91.95 42.81
CK_2_2 37,597,921 35,233,977 3.52G 0.03 96.74 90.81 42.85
DT_1_1 36,559,636 35,218,245 3.52G 0.03 97.37 91.84 42.67
DT_1_2 36,559,636 35,218,245 3.52G 0.04 96.49 90.32 42.69
DT_2_1 35,239,113 33,980,800 3.40G 0.03 97.43 92.00 42.65
DT_2_2 35,239,113 33,980,800 3.40G 0.04 96.54 90.47 42.67
Total 288,301,744 275,425,782 27.54G     
  1. CK_1 and CK_2: Controlled sample (two independent biological replicates)
  2. DT_1 and DT_2: Drought treated sample (two independent biological replicates)
  3. CK_1_1: Reads sequencing of controlled sample 1 from the left
  4. CK_1_2: Reads sequencing of controlled sample 1 from the right
  5. Q20: The percentage of bases with a Phred value >20
  6. Q30: The percentage of bases with a Phred value >30