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Table 5 Frequency of di- and tri-nucleotide EST-SSRs

From: De novo transcriptome sequencing and comprehensive analysis of the drought-responsive genes in the desert plant Cynanchum komarovii

Repeats Repeat numbers Total (%)
Motif 5 6 7 8 9 10 >10
AC/GT - 356 175 127 84 59 49 850 5.47 %
AG/CT - 752 511 377 301 230 73 2,244 14.45 %
AT/AT - 1,589 1,326 1,562 1,385 471 49 6,382 41.09 %
CG/CG - 23 6 - - - - 29 0.19 %
AAC/GTT 243 119 59 4 - - - 425 2.74 %
AAG/CTT 833 479 184 4 - - 2 1,502 9.67 %
AAT/ATT 569 380 151 3 - - - 1,103 7.10 %
ACC/GGT 247 98 59 4 - - 1 409 2.63 %
ACG/CGT 66 29 7 1 - - - 103 0.66 %
ACT/AGT 116 46 15 3 - - - 180 1.16 %
AGC/CTG 477 225 84 1 - - - 787 5.07 %
AGG/CCT 296 135 75 5 - - 1 512 3.30 %
ATC/ATG 398 228 110 4 - - 1 741 4.77 %
CCG/CGG 182 55 24 2 - - - 263 1.69 %
Total 3,427 4,514 2,786 2,097 1,770 760 176 15,530  
(%) 22.07 % 29.07 % 17.94 % 13.50 % 11.40 % 4.89 % 1.13 %