Table 3 Basic features of selected nine E. coli strains and ANI value between these strains with PCN033
Strain | Serotype | Pathotype | Phylogroup | Chromosome | Plasmid size (bp) | |||
|---|---|---|---|---|---|---|---|---|
Size (bp) | Total genes | GC (%) | ANI value with PCN033 | |||||
PCN033 | O11 | ExPEC | D | 4,987,958 | 4,923 | 50.7 | - | 3,319; 4,086; 161,511 |
MG1655 | OR:H48:K- | Commensal | A | 4,641,652 | 4,497 | 50.8 | 97.56 | 0 |
W3110 | - | Commensal | A | 4,646,332 | 4,436 | 50.8 | 97.53 | 0 |
CE10 | O7:K1 | MNEC | F | 5,313,531 | 5,198 | 50.6 | 97.63 | 4,197; 5,163; 1,549; 54,289 |
S88 | O45:K1:H7 | MNEC | B2 | 5,032,268 | 5,187 | 50.7 | 97.2 | 133,853 |
IHE3034 | O18:K1:H7 | MNEC | B2 | 5,108,383 | 4,966 | 50.7 | 97.13 | 0 |
UMN026 | O7:K1 | UPEC | D | 5,202,090 | 5,089 | 50.7 | 98.15 | 122,301; 33,809 |
UTI89 | - | UPEC | B2 | 5,065,741 | 5,127 | 50.6 | 97.15 | 114,230 |
CFT073 | O6:K2:H1 | UPEC | B2 | 5,231,428 | 5,574 | 50.5 | 97.15 | 0 |
APECO1 | O1:K1:H7 | APEC | B2 | 5,082,025 | 4,545 | 50.5 | 97.12 | 174,241; 241,387 |