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Table 4 Fimbrial gene clusters found in PCN033 and PCN061

From: Genome analysis and in vivo virulence of porcine extraintestinal pathogenic Escherichia coli strain PCN033

Typeα

Cluster location in PCN033

Cluster location in PCN061

α

Mat(Ecp)

PCN033_0333-0338a

-

γ1

Smf

PCN033_0593-0597a

PCN061_0579-0584a

Ycb

PCN033_1033-1039a

PCN061_0970-0976a

F9

PCN033_1642-1647a

PCN061_1484-1486

Type I

PCN033_4812-4820a

PCN061_4498-4505a

Yra

-

PCN061_3232-3235a

γ4

Yeh

PCN033_2280-2283a

PCN061_2192-2195a

Yeh-like

PCN033_0019-0021a

PCN061_0022

Yad

PCN033_0142-0148a

PCN061_0136

Mrk(Type III)

-

PCN061p6_067-071a

π

Ybg

PCN033_0733-0736a

PCN061_0735-0742

Yfc

PCN033_2517-2522

PCN061_2433-2438a

Yqi

PCN033_3368-3372a

PCN061_3092-3094a

κ

K99

PCN033_4573

-

Curlin

PCN033_1119-1126a

-

Type IV

-

PCN061p5_124-133a

  1. Typeα based on Wurpel et al. [46] and Nuccio and Baumler [45]
  2. “-” indicates the fimbrial gene clusters are absent
  3. aFimbrial gene clusters are intact