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Table 2 Distribution of sRNAs in different categories in three libraries of P. szechuanica

From: Genome-wide expression profiling of microRNAs in poplar upon infection with the foliar rust fungus Melampsora larici-populina

Category

Sb052

Th053

Control

Unique sRNAs (%)

Total sRNAs (%)

Unique sRNAs (%)

Total sRNAs (%)

Unique sRNAs (%)

Total sRNAs (%)

Total

2905624(100)

17557485(100)

3287847(100)

19398402(100)

2797933(100)

17764475(100)

exon

136541 (4.70)

576314(3.28)

139463(4.24)

553903(2.86)

136964(4.89)

674443(3.80)

intron

109233(3.76)

455077(2.59)

111882(3.40)

441890(2.31)

109735(3.93)

472656(2.66)

miRNA

35186(1.21)

7360137(41.92)

38672(1.18)

7664446(39.51)

36008(1.29)

7911943(44.54)

rRNAetca

247466(8.52)

3721683(21.2)

335307(10.21)

4799682(24.75)

242107(8.65)

2958184(16.65)

repeat

854(0.03)

3168(0.02)

968(0.03)

3076(0.02)

874(0.03)

3268(0.02)

unannb

2376344(81.78)

5441106(30.99)

2661555(80.95)

5929105(30.56)

2272245(81.21)

5743981(32.33)

  1. arRNAetc included rRNA, snRNA, snoRNA and tRNA
  2. bunannotated reads