Table 6 tRNAs in mature pollen. Log 2 fold changes (log2fc) of significantly differentially expressed tRNAs (fdr < 0.05) are shown
From: Identification of novel small ncRNAs in pollen of tomato
AA | tRNA id | log2fc | fdr | AA | tRNA id | log2fc | fdr |
|---|---|---|---|---|---|---|---|
ALA | sly-tRNA-codon = AGC;Ala | 1.33 | 0.01 | GLY | sly-tRNA-codon = CCC;Gly | −2.43 | 0 |
sly-tRNA-codon = TGC;Ala | 1.23 | 0.03 | sly-tRNA-codon = TCC;Gly | −0.99 | 0.04 | ||
sly-tRNA-codon = AGC;Ala-2 | 1.31 | 0.01 | sly-tRNA-codon = TCC;Gly-11 | −1.03 | 0.04 | ||
sly-tRNA-codon = TGC;Ala-2 | 1.3 | 0.02 | sly-tRNA-codon = TCC;Gly-12 | −1.25 | 0.01 | ||
sly-tRNA-codon = AGC;Ala-3 | 1.31 | 0.01 | sly-tRNA-codon = CCC;Gly-2 | −2.44 | 0 | ||
sly-tRNA-codon = TGC;Ala-4 | 1.3 | 0.02 | sly-tRNA-codon = TCC;Gly-2 | −1.09 | 0.02 | ||
sly-tRNA-codon = TGC;Ala-5 | 1.3 | 0.02 | sly-tRNA-codon = CCC;Gly-3 | −2.36 | 0 | ||
sly-tRNA-codon = AGC;Ala-5 | 1.14 | 0.03 | sly-tRNA-codon = TCC;Gly-3 | −1.02 | 0.04 | ||
sly-tRNA-codon = AGC;Ala-6 | 1.32 | 0.01 | sly-tRNA-codon = CCC;Gly-4 | −2.39 | 0 | ||
sly-tRNA-codon = TGC;Ala-6 | 1.29 | 0.02 | sly-tRNA-codon = TCC;Gly-4 | −1.38 | 0 | ||
sly-tRNA-codon = TGC;Ala-7 | 1.3 | 0.02 | sly-tRNA-codon = GCC;Gly-5 | −0.85 | 0.03 | ||
GLU | sly-tRNA-codon = CTC;Glu | −1.67 | 0 | sly-tRNA-codon = TCC;Gly-5 | −1.04 | 0.03 | |
sly-tRNA-codon = TTC;Glu | −1.49 | 0 | sly-tRNA-codon = GCC;Gly-6 | −2.05 | 0 | ||
sly-tRNA-codon = CTC;Glu-10 | −2 | 0 | sly-tRNA-codon = TCC;Gly-6 | −1.04 | 0.04 | ||
sly-tRNA-codon = TTC;Glu-11 | −1.4 | 0 | sly-tRNA-codon = TCC;Gly-7 | −1.03 | 0.03 | ||
sly-tRNA-codon = CTC;Glu-12 | −1.99 | 0 | sly-tRNA-codon = CCC;Gly-8 | −1.39 | 0 | ||
sly-tRNA-codon = CTC;Glu-2 | −2.03 | 0 | sly-tRNA-codon = TCC;Gly-8 | −1.04 | 0.04 | ||
sly-tRNA-codon = TTC;Glu-2 | −1.46 | 0 | sly-tRNA-codon = CCC;Gly-9 | −2.19 | 0 | ||
sly-tRNA-codon = CTC;Glu-3 | −2.37 | 0 | sly-tRNA-codon = TCC;Gly-9 | −1.03 | 0.04 | ||
sly-tRNA-codon = TTC;Glu-3 | −2.12 | 0 | SER | sly-tRNA-codon = GCT;Ser | 1.96 | 0 | |
sly-tRNA-codon = CTC;Glu-4 | −2.17 | 0 | sly-tRNA-codon = TGA;Ser | 1.28 | 0.02 | ||
sly-tRNA-codon = TTC;Glu-4 | −1.45 | 0 | sly-tRNA-codon = TGA;Ser-12 | 1.3 | 0.02 | ||
sly-tRNA-codon = CTC;Glu-5 | −1.97 | 0 | sly-tRNA-codon = TGA;Ser-13 | 1.3 | 0.02 | ||
sly-tRNA-codon = TTC;Glu-5 | −1.36 | 0 | sly-tRNA-codon = GCT;Ser-2 | 1.67 | 0 | ||
sly-tRNA-codon = CTC;Glu-6 | −2.02 | 0 | sly-tRNA-codon = TGA;Ser-2 | 1.31 | 0.01 | ||
sly-tRNA-codon = TTC;Glu-6 | −1.39 | 0 | sly-tRNA-codon = TGA;Ser-3 | 1.55 | 0 | ||
sly-tRNA-codon = CTC;Glu-7 | −2 | 0 | sly-tRNA-codon = GCT;Ser-3 | 1.54 | 0.01 | ||
sly-tRNA-codon = TTC;Glu-7 | −1.42 | 0 | sly-tRNA-codon = GCT;Ser-4 | 1.91 | 0 | ||
sly-tRNA-codon = TTC;Glu-8 | −1.39 | 0 | sly-tRNA-codon = TGA;Ser-4 | 1.63 | 0 | ||
sly-tRNA-codon = TTC;Glu-9 | −1.35 | 0.01 | sly-tRNA-codon = GCT;Ser-6 | 1.35 | 0.03 | ||
GLN | sly-tRNA-codon = CTG;Gln | −1.73 | 0 | sly-tRNA-codon = AGA;Ser | 1.08 | 0.02 | |
sly-tRNA-codon = CTG;Gln-2 | −1.26 | 0.01 | PRO | sly-tRNA-codon = CGG;Pro | −1.81 | 0 | |
sly-tRNA-codon = CTG;Gln-3 | −1.72 | 0 | sly-tRNA-codon = AGG;Pro | −1.58 | 0 | ||
sly-tRNA-codon = CTG;Gln-4 | −2.33 | 0 | sly-tRNA-codon = TGG;Pro-10 | −1.92 | 0 | ||
LEU | sly-tRNA-codon = CAA;Leu-13 | −1.16 | 0.04 | sly-tRNA-codon = AGG;Pro-10 | −1.6 | 0.01 | |
sly-tRNA-codon = CAG;Leu-5 | 1.4 | 0.04 | sly-tRNA-codon = TGG;Pro-11 | −1.92 | 0 | ||
sly-tRNA-codon = CAA;Leu-8 | −1.16 | 0.04 | sly-tRNA-codon = AGG;Pro-12 | −1.58 | 0.01 | ||
VAL | sly-tRNA-codon = AAC;Val-7 | −1.04 | 0.04 | sly-tRNA-codon = TGG;Pro-13 | −1.94 | 0 | |
PRO | sly-tRNA-codon = AGG;Pro-3 | −1.52 | 0.01 | sly-tRNA-codon = TGG;Pro-14 | −1.92 | 0 | |
sly-tRNA-codon = AGG;Pro-4 | −1.62 | 0.01 | sly-tRNA-codon = CGG;Pro-14 | −1.53 | 0 | ||
sly-tRNA-codon = TGG;Pro-5 | −1.67 | 0 | sly-tRNA-codon = CGG;Pro-15 | −1.54 | 0 | ||
sly-tRNA-codon = AGG;Pro-6 | −1.62 | 0.01 | sly-tRNA-codon = TGG;Pro-2 | −1.66 | 0 | ||
sly-tRNA-codon = TGG;Pro-7 | −1.96 | 0 | sly-tRNA-codon = AGG;Pro-2 | −1.53 | 0 | ||
sly-tRNA-codon = CGG;Pro-8 | −2.41 | 0 | sly-tRNA-codon = CGG;Pro-3 | −2.27 | 0 | ||
sly-tRNA-codon = AGG;Pro-8 | −1.57 | 0.01 | sly-tRNA-codon = TGG;Pro-3 | −1.7 | 0 | ||
sly-tRNA-codon = TGG;Pro-9 | −1.86 | 0 |  |  |  |