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Table 2 Candidate pathogenicity related genes in oomycetes genomes

From: Genome analyses of the sunflower pathogen Plasmopara halstedii provide insights into effector evolution in downy mildews and Phytophthora

 

Pl. halstedii

Hy. arabidopsidis

Ph. infestans

Py. ultimum

Al. laibachii

ATP-binding cassette (ABC) transportera

32

35 (53)

127 (156)

112 (173)

26 (41)

Phospholipasea

17

23 (13)

43 (36)

25 (20)

19 (13)

Lipasea

24

30 (10)

57 (19)

36 (31)

23 (12)

Cysteine proteasea

54

51 (7)

64 (33)

75 (42)

48 (16)

Serine proteasea

62

73 (34)

106 (60)

149 (85)

52 (−)

Aspartic proteasea

15

14 (9)

19 (12)

34 (22)

16 (10)

Cutinaseb

2

2 (2)

4 (4)

0 (0)

3 (2)

NPP1-like (necrosis-inducing proteins)b

19

21 (29)

27 (27)

7 (7)

0 (0)

Pectate lyasesb

3

8 (8)

36 (30)

15 (15)

0 (1)

Cytochrome P450sb

14

18 (16)

30 (19)

44 (41)

3 (3)

Pectin esteraseb

5

4 (4)

11 (11)

0 (0)

0 (0)

Elictins likeb

16

16 (1)

45 (40)

46 (24)

9 (3)

RxLR effector family candidatesc

274

134

505

0

49

Crincklers (CRN family candidates)c

77

20

196

26

3

  1. aGenerated using PANTHER; bFrom InterproScan; cGenerated manually; Numbers in bracket represent the published number of predicted genes. Numbers in bold represent the highest number of genes