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Table 4 Enriched GO terms among upregulated transcripts in reproductive saccular epithelium

From: Gene expression underlying enhanced, steroid-dependent auditory sensitivity of hair cell epithelium in a vocal fish

  GO-ID GO term p
Biological process GO:0000184 Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 1.2E-14
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 6.6E-14
GO:0006415 Translational termination 2.4E-13
GO:0015986 ATP synthesis coupled proton transport 3.9E-12
GO:0019083 Viral transcription 6.7E-11
GO:0006446 Regulation of translational initiation 9.7E-11
GO:0006120 Mitochondrial electron transport, NADH to ubiquinone 8.6E-10
GO:0006744 Ubiquinone biosynthetic process 2.1E-09
GO:0006123 Mitochondrial electron transport, cytochrome c to oxygen 2.1E-09
GO:0006096 Glycolysis 1.2E-08
GO:0006457 Protein folding 1.7E-08
GO:0006094 Gluconeogenesis 2.6E-08
GO:0000028 Ribosomal small subunit assembly 2.0E-07
GO:0031101 Fin regeneration 2.1E-07
GO:0006448 Regulation of translational elongation 2.1E-07
GO:0019643 Reductive tricarboxylic acid cycle 1.6E-06
GO:0015976 Carbon utilization 3.0E-05
GO:0030036 Actin cytoskeleton organization 3.4E-05
GO:0006364 rRNA processing 3.9E-05
GO:0005980 Glycogen catabolic process 6.2E-05
Molecular function GO:0003735 Structural constituent of ribosome 4.6E-37
GO:0008137 NADH dehydrogenase (ubiquinone) activity 6.2E-11
GO:0003743 Translation initiation factor activity 1.1E-09
GO:0004129 Cytochrome-c oxidase activity 2.5E-09
GO:0051082 Unfolded protein binding 9.4E-08
GO:0046933 Proton-transporting ATP synthase activity, rotational mechanism 5.7E-07
GO:0003746 Translation elongation factor activity 2.4E-06
GO:0019843 rRNA binding 1.8E-05
GO:0004365 GAPDH (NAD+) (phosphorylating) activity 6.7E-05
GO:0072542 Protein phosphatase activator activity 8.5E-05
GO:0016936 Galactoside binding 9.9E-05
Cellular component GO:0022627 Cytosolic small ribosomal subunit 1.5E-22
GO:0022625 Cytosolic large ribosomal subunit 1.3E-12
GO:0005852 Eukaryotic translation initiation factor 3 complex 1.6E-10
GO:0045277 Respiratory chain complex IV 2.1E-09
GO:0045095 Keratin filament 6.0E-09
GO:0005747 Mitochondrial respiratory chain complex I 2.0E-08
GO:0045261 Proton-transporting ATP synthase complex, catalytic core F(1) 3.5E-07
GO:0042470 Melanosome 4.3E-05
GO:0005730 Nucleolus 5.7E-05
GO:0005861 Troponin complex 5.9E-05
GO:0005832 Chaperonin-containing T-complex 6.2E-05
GO:0000276 Mitochondrial H+-transporting ATP synthase complex, coupling factor F(o) 6.2E-05
  1. Enrichment was based on a one-tailed Fisher's exact test with p-values < 10−5. Transcripts involved in translation and cellular respiration were notably upregulated in the reproductive saccular epithelium. No GO terms were enriched among non-reproductive, upregulated transcripts