Transcriptome profile of liver at different physiological stages reveals potential mode for lipid metabolism in laying hens

Table 1 Characteristics of the reads from six chicken liver libraries

Sample ID^a	Raw bases (Gb)	Q20 value (%)	GC content (%)	Raw reads	Clean reads	Mapped reads	Mapped unique reads^b	Mapping ratio (%)^c
L20–1	4.5	95.4	47	44674654	42381020	36083033	35118821	85.1
L20–2	6.5	95.3	47	65393800	61933858	52824621	51312296	85.3
L20–3	5.3	95.5	47	53050708	50348282	43068094	41902030	85.5
L30–1	6.7	95.5	46	67296120	63775556	54827754	53528180	86.0
L30–2	4.2	95.5	46	42113152	39958736	34571635	33690669	86.5
L30–3	4.4	95.6	46	43548992	41320096	35784180	34935615	86.6

^aL20, liver samples from juveniles; L30, liver samples from egg laying hens. ^bMapped unique reads, reads that matched the reference genome in only one position. ^cMapping ratio, mapped reads/all reads

ISSN: 1471-2164