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Table 4 Genomic regions surrounding four significant SNPs

From: Genome-wide association study dissects genetic architecture underlying longitudinal egg weights in chickens

Tag SNP

Chromosome

Length of block (kb)

SNP number in the block

Nearest genea

Ensembl gene ID

Location (kb)b

rs14916609

GGA1

57.9

19

CAB39L

ENSGALG00000017005

Intron

CDADC1

ENSGALG00000017004

Downstream_18.2

rs314058619

GGA1

4.4

2

FKHR (FOXO1)

ENSGALG00000017034

Intron

rs316497033

GGA3

15.2

8

KCNG3

ENSGALG00000009919

Intron

rs14491030

GGA4

17.2

9

NCAPG

ENSGALG00000014425

Exon 14

  1. aIdentification of the gene according to Ensembl genes database 76
  2. bDistance in kb of SNP for the gene