A dense SNP genetic map constructed using restriction site-associated DNA sequencing enables detection of QTLs controlling apple fruit quality

Table 2 Features of markers developed from restriction-site associated DNA sequencing in F1 progeny and parents

Restriction enzyme	Plant materials	No. of detected SNPs	No. of Homo loci /Homo rate (%)	No. of Hete loci /Hete rate (%)
EcoRI	Jonathan	15,166	9917/65.39	5249/34.61
	Golden Delicious	15,255	9899/64.89	5356/35.11
	Progeny	14,094	8151/57.83	5943/42.17
HindIII	Jonathan	37,861	28,531/75.36	9330/24.64
	Golden Delicious	37,742	28,780/76.25	8962/23.75
	Progeny	33,766	25,434/75.32	8332/24.68

The F1 progeny includes 318 individuals generated from ‘Jonathan’ × ‘Golden Delicious’. Homo homozygous, Hete heterozygous

ISSN: 1471-2164