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Table 2 Features of markers developed from restriction-site associated DNA sequencing in F1 progeny and parents

From: A dense SNP genetic map constructed using restriction site-associated DNA sequencing enables detection of QTLs controlling apple fruit quality

Restriction enzyme Plant materials No. of detected SNPs No. of Homo loci /Homo rate (%) No. of Hete loci /Hete rate (%)
EcoRI Jonathan 15,166 9917/65.39 5249/34.61
Golden Delicious 15,255 9899/64.89 5356/35.11
Progeny 14,094 8151/57.83 5943/42.17
HindIII Jonathan 37,861 28,531/75.36 9330/24.64
Golden Delicious 37,742 28,780/76.25 8962/23.75
Progeny 33,766 25,434/75.32 8332/24.68
  1. The F1 progeny includes 318 individuals generated from ‘Jonathan’ × ‘Golden Delicious’. Homo homozygous, Hete heterozygous