Table 3 Mapping statistics for RNA-seq onto the equCab2 reference genome assembly
From: Generation of a de novo transcriptome from equine lamellar tissue
Sample | Phenotype | Total Reads | Mapped Reads | % Mapped | SNPs |
|---|---|---|---|---|---|
CU1 | control | 36,277,643 | 31,561,549 | 87 % | 60,580 |
CU18 | acute | 43,422,463 | 38,211,767 | 88 % | 72,281 |
LSU-J | chronic | 33,278,897 | 29,618,218 | 89 % | 58,368 |