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Table 5 Putative novel loci validated by RT-PCR

From: Generation of a de novo transcriptome from equine lamellar tissue

Name Chr Start End ORF length Exons E BLASTX
UN20159 1 160767946 160771835 85 4 1.2E-40 AAA80518 T-cell receptor alpha chain (IgC TCRA) [Equus caballus]
UN14299 4 24422341 24427035 83 4 none none
UN30143 5 15325547 15363449 515 16 7.3E-22 XP_003209297 PREDICTED: intraflagellar transport protein 80 homolog [Meleagris gallopavo]
UN27297 5 74952780 74965671 177 6 1.7E-56 XP_001493637 PREDICTED: guanylate-binding protein 5 [Equus caballus]
UN27113 9 81709438 81711119 137 4 2.9E-60 XP_001917082 PREDICTED: lymphocyte antigen 6H-like [Equus caballus]
UN28086 11 880333 894532 240 6 9.9E-31 NP_663348 secreted and transmembrane protein 1A precursor [Mus musculus]
UN62514 11 37045433 37058857 162 5 1.5E-11 ACI67873163 Perlwapin [Salmo salar]
UN21936 12 19828520 19834360 195 5 2.1E-14 NP_001243909 placenta-specific protein 1 precursor [Equus caballus]
UN70945 22 34309639 34312469 141 4 1.7E-54 AES10462 antileukoproteinase-like protein [Mustela putorius furo]
UN26965 24 44802220 44806274 142 5 3.5E-21 XP_002696828 PREDICTED: uncharacterized protein LOC509029 [Bos taurus]
UN26584 28 21567866 21620053 248 7 5.8E-102 XP_003952339 PREDICTED: uncharacterized protein LOC101059192 [Pan troglodytes]
UN50658 X 2231083 2240297 174 7 1.0E-38 XP_003134963 PREDICTED: odorant-binding protein-like [Sus scrofa]