Fig. 5
Local representation of marker-trait associations with absolute values for flowering time (BOF-ABS), plant height (HEI-ABS) and seed yield (YIE-ABS) in a region of B.napus chromosome A09. Each environment is represented in a unique colour consistent between representations, as shown by the colour key. The solid line represents the significance threshold 0.1 after Bonferroni correction, the dashed line represents the significance threshold in this analysis (−log10(p) > 4), and the dotted line represents the threshold for suggestive associations (−log10(p) > 3). The positions of 5 candidate genes within the peak interval are indicated by black squared dots. The representation below shows the local conservation of linkage disequilibrium (r 2) among the SNPs in the trait-associated region is represented by a heat map