Skip to main content

Table 2 Properties of stem loops Variable Region #3

From: Complexity of a small non-protein coding sequence in chromosomal region 22q11.2: presence of specialized DNA secondary structures and RNA exon/intron motifs

Species/Sequence

stem loop

Base pairs

TATAATATA near loop

Delta G

Human

1

109

No

−51 kcal/mol

 

2

120

Yes

−52 kcal/mol

Chimpanzee

1

106

Yes

−44 kcal/mol.

Breakpoint

Type C

1

294

Yes

−319 kcal/mol

Random

    

Sequence

1a

123

No

−19 kcal/mol

  1. aStem loop shown in Additional file 6: Figure S5