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Table 2 Summary of the 44 L. monocytogenes genome annotations

From: Development of ListeriaBase and comparative analysis of Listeria monocytogenes

Lineage Strain Serotype Size (bp) # ORFs # tRNAs GC (%) Isolated from Country Year of isolation
Lineage I 07PF0776 4b 2,901,562 2942 67 38.04 Human myocardial abscess USA -
  ATCC 19117 4d 2,951,805 2957 67 37.99 Sheep USA -
  CLIP 80459 4b 2,912,690 2915 67 38.06 Clinical outbreak of listeriosis France -
  L312 4b 2,912,346 3045 67 38.06 Cheese - -
  F2365 4b 2,905,187 2920 67 38.04 Cheese USA 1985
  LL195 4b 2,936,689 2920 67 38.01 - Switzerland 1983 – 1987
  SLCC2482 7 2,972,810 2968 67 37.95 Human - 1966
  SLCC2378 4e 2,972,172 2968 66 37.95 Poultry - -
  SLCC2540 3b 2,966,146 2994 67 38.08 Human USA 1956
  SLCC2755 1/2b 2,907,142 2972 67 38.01 Chinchilla - 1967
  J1816 4b 2,947,460 3060 58 37.97 Turkey deli meat USA 2002
  J1-220 4b 3,032,271 3088 67 37.94 Vegetable USA 1979
  CFSAN006122 - 2,906,670 2922 67 38 Cheese USA 2013
  J2-064 1/2b 2,943,218 2945 58 38 Cow - -
  NE dc2014 - 2,904,662 2920 67 38 Cheese - -
  J2-1091 - 2,981,886 3025 67 38 Animal USA 1995
  J1776 4b 2,953,719 2995 67 37.9 Turkey deli USA 2002
  J1817 4b 2,953,716 2999 67 37.9 Turkey deli USA 2002
  J1926 4b 2,953,708 2996 67 37.9 Turkey deli USA 2002
  N1-011A - 3,094,342 3169 67 38 - - -
  R2-502 1/2b 3,034,043 3079 67 37.9 - - 1994
  WSLC1042 4b 2,942,168 2974 67 38 - Germany -
Lineage II 08-5578 1/2a 3,032,288 3112 58 37.96 Human blood specimen Canada 2008
  08-5923 1/2a 2,999,054 3063 58 37.96 Human Canada 2008
  10403S 1/2a 2,903,106 2944 67 38.03 Human skin lesion USA 1968
  EGD-e 1/2a 2,944,528 2996 67 37.98 Rabbit UK 1926
  Finland 1998 3a 2,874,431 2904 67 38.05 - Finland 1998
  FSL R2-561 1/2c 2,973,801 3051 67 37.96 - - -
  J0161 1/2a 3,000,464 3060 58 37.86 Human listeriosis outbreak - -
  SLCC2372 1/2c 2,840,185 3037 67 38.26 Human UK 1935
  SLCC2479 3c 2,976,958 3031 65 37.93 - - 1966
  SLCC5850 1/2a 2,882,234 2976 67 38.04 Rabbit UK 1924
  SLCC7179 3a 2,972,254 2927 67 37.95 Cheese Austria 1986
  NCCP No. 15743 1/2a 2,803,433 2868 67 38.1 - - -
  6179 1/2a 3,010,620 3071 49 37.9 Cheese - -
  C1-387 1/2a 2,988,947 3043 67 38 Turkey breast New York 1999
  EGD 1/2a 2,907,193 2969 67 38 Animal - 1926
  J2-031 1/2a 2,958,908 3024 67 38 Cow - 1996
  R479a 1/2a 2,944,998 3008 58 37.9 Smoked Salmon - -
  WSLC1001 1/2a 2,951,235 3031 67 38 - Germany -
Lineage III HCC23 4a 2,976,212 3048 67 38.19 Catfish brain USA -
  L99 4a 2,979,198 2911 67 38.19 Cheese Netherlands 1950
  M7 4a 2,976,163 3049 67 38.19 Cow’s milk China -
  SLCC2376 4c 2,941,360 2839 67 37.99 Poultry - -
  1. (All the genomes referred in the table are complete genomes)