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Table 6 The function of unigenes affected by SNP and indels in SR3 and JN177

From: Asymmetric somatic hybridization induces point mutations and indels in wheat

Process Unigene number SNP (per 1000 nt) InDel (per 1000 nt)
  JN177 SR3 SR3-JN177 SR3-Ta JN177-Ta SR3-JN177 SR3-Ta JN177-Ta
Chromatin assembly or disassembly 54 92 18.17 7.07 4.59 0.95 0.85 0.43
Nucleosome assembly 49 83 19.21 6.8 3.72 0.92 0.75 0.38
Regulation of transcription 96 204 10.79 9.85 11.49 1.94 1.53 1.22
RNA processing 35 85 10.39 10.65 9.73 1.94 1.33 1.02
Translation 254 373 13.30 8.77 8.69 1.71 1.40 1.08
Protein modification process 266 440 11.39 10.61 10.19 1.87 1.46 1.32
Protein phosphorylation 181 230 10.81 12.08 11.7 2.09 1.53 1.41
Post-translational protein modification 13 12 13.97 9.92 7.98 1.28 1.23 1.00
  1. SR3-JN177: JN177 unigene sequences queried with those of SR3. SR3-Ta: SR3 unigene sequences queried with wheat ESTs housed in GenBank. JN177-Ta: JN177 unigene sequences queried with wheat ESTs housed in GenBank