Table 4 Shared private runs of homozygosity (ROH) in 50-SNP windows
ECA | Position | Number of SNPs in shared parts of ROH regions | Size of shared ROH (bp) | Gene ID | Human ortholog | Gene name/function |
|---|---|---|---|---|---|---|
1 | 135530600-135573693 | 192 | 43094 | ENSECAG00000010951, ENSECAG00000001112, ENSECAG00000004438, ENSECAG00000001272 | DYX1C1, novel gene, novel gene, novel gene | dyslexia susceptibility 1 candidate 1 |
4 | 13434735-13434933 | 17 | 199 | - | - | - |
4 | 16813531-16813643 | 4 | 113 | - | - | - |
4 | 48740665-48745235 | 7 | 4571 | - | - | - |
6 | 70162066-70181092 | 35 | 19027 | ENSECAG00000006878 | CSAD | cysteine sulfinic acid decarboxylase |
6 | 80540783-80586091 | 227 | 45309 | ENSECAG00000024798 | TBC1D30 | TBC1 domain family, member 30 |
6 | 81785611-81786700 | 28 | 1090 | - | - | - |
8 | 50498336-50582995 | 392 | 84660 | - | - | - |
12 | 9146140-9204195 | 70 | 58056 | ENSECAG00000019892 | ALX4 | ALX homeobox 4 |
14 | 30412967-30412967 | 1 | 1 | - | - | - |
14 | 85610289-85611904 | 69 | 1616 | - | - | - |
15 | 5973552-5973559 | 3 | 8 | - | - | - |
15 | 79802636-79806388 | 119 | 3753 | - | - | - |
16 | 23766626-23821105 | 311 | 54480 | ENSECAG00000002081 | novel gene | |
22 | 4841367-4841408 | 3 | 42 | ENSECAG00000004364 | CFAP61 | cilia and flagella associated protein 61 |
22 | 16310734-16310750 | 3 | 17 | - | - | - |
28 | 39200676-39218496 | 29 | 17821 | - | - | - |
31 | 16634998-16711978 | 347 | 76981 | ENSECAG00000023857 | PPP1R14C | protein phosphatase 1, regulatory (inhibitor) subunit 14C |